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AT3G19000.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G19010.1); Has 8949 Blast hits to 8896 proteins in 1015 species: Archae - 0; Bacteria - 1163; Metazoa - 122; Fungi - 1047; Plants - 5005; Viruses - 0; Other Eukaryotes - 1612 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G19000-MONOMEReggNOG:COG3491eggNOG:KOG0143EMBL:AP000735
EMBL:AY099808EMBL:BT000306EMBL:CP002686EnsemblPlants:AT3G19000
EnsemblPlants:AT3G19000.1entrez:821433ExpressionAtlas:Q9LJ66Gene3D:2.60.120.330
GeneID:821433GO:GO:0005506GO:GO:0016491Gramene:AT3G19000.1
gramene_pathway:1.14.11.9gramene_pathway:PWY-5152gramene_pathway:PWY1F-823gramene_pathway:PWY1F-FLAVSYN
hmmpanther:PTHR10209hmmpanther:PTHR10209:SF127HOGENOM:HOG000276735InterPro:IPR002283
InterPro:IPR005123InterPro:IPR026992InterPro:IPR027443KEGG:ath:AT3G19000
OMA:FFFPSHEPfam:PF03171Pfam:PF14226Pfscan:PS51471
PhylomeDB:Q9LJ66PRINTS:PR00682PROSITE:PS51471Proteomes:UP000006548
RefSeq:NP_566623.1SMR:Q9LJ66SUPFAM:SSF51197TAIR:AT3G19000
UniGene:At.27651UniGene:At.75264UniGene:At.75342UniProt:Q9LJ66
Coordinates (TAIR10) chr3:-:6553668..6554987
Molecular Weight (calculated) 40660.70 Da
IEP (calculated) 5.31
GRAVY (calculated) -0.59
Length 352 amino acids
Sequence (TAIR10)
(BLAST)
001: MGELDEAFIQ APEHRPNTHL TNSGDFIFSD EIPTIDLSSL EDTHHDKTAI AKEIAEACKR WGFFQVINHG LPSALRHRVE KTAAEFFNLT TEEKRKVKRD
101: EVNPMGYHDE EHTKNVRDWK EIFDFFLQDS TIVPASPEPE DTELRKLTNQ WPQNPSHFRE VCQEYAREVE KLAFRLLELV SISLGLPGDR LTGFFNEQTS
201: FLRFNHYPPC PNPELALGVG RHKDGGALTV LAQDSVGGLQ VSRRSDGQWI PVKPISDALI INMGNCIQVW TNDEYWSAEH RVVVNTSKER FSIPFFFFPS
301: HEANIEPLEE LISEENPPCY KKYNWGKFFV SRNRSDFKKL EVENIQIDHF KA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)