suba logo
AT4G35640.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : serine acetyltransferase 3;2
Curator
Summary (TAIR10)
Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced in both roots and shoots under sulfur-starved conditions.
Computational
Description (TAIR10)
serine acetyltransferase 3;2 (SERAT3;2); CONTAINS InterPro DOMAIN/s: Hexapeptide transferase, conserved site (InterPro:IPR018357), Serine O-acetyltransferase (InterPro:IPR005881), Trimeric LpxA-like (InterPro:IPR011004), Serine acetyltransferase, N-terminal (InterPro:IPR010493); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzymes superfamily protein (TAIR:AT2G17640.1); Has 22944 Blast hits to 22937 proteins in 2578 species: Archae - 362; Bacteria - 17118; Metazoa - 7; Fungi - 225; Plants - 280; Viruses - 18; Other Eukaryotes - 4934 (source: NCBI BLink).
Protein Annotations
BioGrid:14998EC:2.3.1.30eggNOG:COG1045eggNOG:ENOG410INAF
EMBL:AF331847EMBL:AL031135EMBL:AL161587EMBL:BT004080
EMBL:BT005047EMBL:CP002687EnsemblPlants:AT4G35640EnsemblPlants:AT4G35640.1
entrez:829716GeneID:829716GO:GO:0000103GO:GO:0005829
GO:GO:0006535GO:GO:0009001Gramene:AT4G35640.1gramene_pathway:2.3.1.30
gramene_pathway:CYSTSYN-PWYhmmpanther:PTHR23416hmmpanther:PTHR23416:SF63HOGENOM:HOG000049437
InParanoid:Q8W2B8InterPro:IPR001451InterPro:IPR005881InterPro:IPR010493
InterPro:IPR011004InterPro:IPR018357KEGG:00270+2.3.1.30KEGG:00920+2.3.1.30
KEGG:ath:AT4G35640KO:K00640MINT:MINT-8061727OMA:DEFPFER
PaxDb:Q8W2B8Pfam:PF00132Pfam:PF06426Pfam:Q8W2B8
PhylomeDB:Q8W2B8PIR:T04669PRIDE:Q8W2B8PRO:PR:Q8W2B8
PROSITE:PS00101ProteinModelPortal:Q8W2B8Proteomes:UP000006548RefSeq:NP_195289.3
scanprosite:PS00101SMART:SM00971SMR:Q8W2B8STRING:3702.AT4G35640.1
SUPFAM:SSF51161TAIR:AT4G35640tair10-symbols:ATSERAT3;2tair10-symbols:SERAT3;2
TIGRfam:TIGR01172TIGRFAMs:TIGR01172UniGene:At.19734UniGene:At.71197
UniPathway:UPA00136UniProt:Q8W2B8
Coordinates (TAIR10) chr4:-:16905755..16907977
Molecular Weight (calculated) 38425.90 Da
IEP (calculated) 5.76
GRAVY (calculated) -0.01
Length 355 amino acids
Sequence (TAIR10)
(BLAST)
001: MACINGENRD FSSSSSLSSL PMIVSRNFSA RDDGETGDEF PFERIFPVYA RGTLNPVADP VLLDFTNSSY DPIWDSIREE AKLEAEEEPV LSSFLYASIL
101: SHDCLEQALS FVLANRLQNP TLLATQLMDI FCNVMVHDRG IQSSIRLDVQ AFKDRDPACL SYSSAILHLK GYLALQAYRV AHKLWKQGRK LLALALQSRV
201: SEVFGIDIHP AARIGKGILL DHGTGVVIGE TAVIGDRVSI LHGVTLGGTG KETGDRHPNI GDGALLGACV TILGNIKIGA GAMVAAGSLV LKDVPSHSMV
301: AGNPAKLIGF VDEQDPSMTM EHDATREFFQ NVAVAYRETI PNGSSVSGSC RERRH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)