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AT1G75280.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:17644812 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NmrA-like negative transcriptional regulator family protein
Curator
Summary (TAIR10)
isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.
Computational
Description (TAIR10)
NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to cyclopentenone; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G75290.1); Has 2708 Blast hits to 2703 proteins in 629 species: Archae - 36; Bacteria - 1150; Metazoa - 16; Fungi - 663; Plants - 623; Viruses - 7; Other Eukaryotes - 213 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2155-MONOMEREC:1.3.1.-eggNOG:ENOG410IIFGeggNOG:ENOG410Y0DY
EMBL:AC025814EMBL:AY065395EMBL:AY084851EMBL:AY117175
EMBL:CP002684EMBL:Z49777EnsemblPlants:AT1G75280EnsemblPlants:AT1G75280.1
entrez:843865Gene3D:3.40.50.720GeneID:843865Genevisible:P52577
GO:GO:0005737GO:GO:0005886GO:GO:0006979GO:GO:0016491
GO:GO:0046686Gramene:AT1G75280.1hmmpanther:PTHR10366hmmpanther:PTHR10366:SF391
HOGENOM:HOG000237415InParanoid:P52577InterPro:IPR008030InterPro:IPR016040
KEGG:ath:AT1G75280OMA:VLSINHAPaxDb:P52577Pfam:P52577
Pfam:PF05368PhylomeDB:P52577PIR:C96783PIR:S57613
PRIDE:P52577PRO:PR:P52577ProteinModelPortal:P52577Proteomes:UP000006548
RefSeq:NP_565107.1SMR:P52577STRING:3702.AT1G75280.1SUPFAM:SSF51735
TAIR:AT1G75280UniGene:At.18297UniProt:P52577
Coordinates (TAIR10) chr1:+:28252030..28253355
Molecular Weight (calculated) 33738.50 Da
IEP (calculated) 5.73
GRAVY (calculated) -0.05
Length 310 amino acids
Sequence (TAIR10)
(BLAST)
001: MATEKSKILV IGGTGYIGKF LVEASAKAGH STFALVREAT LSDPVKGKTV QSFKDLGVTI LHGDLNDHES LVKAIKQVDV VISTVGSMQI LDQTKIISAI
101: KEAGNVKRFL PSEFGVDVDR TSAVEPAKSA FAGKIQIRRT IEAEGIPYTY AVTGCFGGYY LPTLVQFEPG LTSPPRDKVT ILGDGNAKAV INKEEDIAAY
201: TIKAVDDPRT LNKILYIKPS NNTLSMNEIV TLWEKKIGKS LEKTHLPEEQ LLKSIQESPI PINVVLSINH AVFVNGDTNI SIEPSFGVEA SELYPDVKYT
301: SVDEYLSYFA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)