AT1G69450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.710 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Early-responsive to dehydration stress protein (ERD4) | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Early-responsive to dehydration stress protein (ERD4); LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: hypothetical protein 1 (TAIR:AT3G01100.1); Has 1403 Blast hits to 1256 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 177; Fungi - 667; Plants - 417; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:26107120..26110006 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 81794.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.80 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.28 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 711 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLLSALLMSV GINSCLCVLL FILYSVLRKQ PRNYEVFLPR RLANGTYKRR RNKVARYIPS LKWIWKSWRP TEKELMESSG LDGVVFMRMI TFSLKVFLFA 101: GIIGVFVLLP VNCFGDQLTV IDYADWSANS LDLFSVANLK VRSQWLWVHF GAIYLVTVFV CCLLYFEFRY IALKRIEHFY SSKPKPEQFT ILVRNIPSSD 201: GSSVSDTVDR FFGENHSSTY FSHVVIHRTS KLRSVVDKAK KLYKEVKHKK PVKKTPMRFF SRKDNTEGHY ESVLQEMEQN IRLGQAEVSA PGKEVRAAFV 301: SFKSRYGAAT ALHMPQSINP TYWLTEPAPE PHDVHWPFFS ASFMQKWLAK ILVVFACLLL TILFLVPVVL VQGLTNLPAL EFMFPFLSLI LSMKVVSQII 401: TGYLPSLILQ TSLKVVPPTM EFLSSIQGHI CHSDIQKSAC NKVIWFTIWN VFFATVFSGS AFYKLSVILD PKQIPLKLAV AVPAQASFFI AYVVTTGWTD 501: TLTELFRVVP FMVSYIKRSF EPSDENEFVV PPMRYHRDTP RVLFFGLLGI TYFFLAPLIL PFILLYFILA YIIYRNQFMN VYAPKFDTGG MFWPMIHYTM 601: IFSLVLMQAI AIGLFALKKM ELATYLLVPL PVFTLLFNEF CRKRFMPIFT DYPAEVLTKR DKEDRNDPTM PEFYNNLVSA YKDPALLPLR FSGSGSRNDS 701: LTSPLLSFSE V |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)