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AT1G69360.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant protein of unknown function (DUF863)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant protein of unknown function (DUF863); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF863, plant (InterPro:IPR008581); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G26620.1); Has 257 Blast hits to 226 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 245; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVTMeggNOG:ENOG410YECTEMBL:CP002684EnsemblPlants:AT1G69360
EnsemblPlants:AT1G69360.1entrez:843268GeneID:843268Gramene:AT1G69360.1
hmmpanther:PTHR33167hmmpanther:PTHR33167:SF3InParanoid:F4I0M4InterPro:IPR008581
KEGG:ath:AT1G69360OMA:ILEHEETPaxDb:F4I0M4Pfam:PF05904
PRIDE:F4I0M4ProteinModelPortal:F4I0M4Proteomes:UP000006548RefSeq:NP_564962.1
TAIR:AT1G69360UniGene:At.25470UniProt:F4I0M4
Coordinates (TAIR10) chr1:-:26072520..26075420
Molecular Weight (calculated) 99184.50 Da
IEP (calculated) 6.01
GRAVY (calculated) -0.69
Length 896 amino acids
Sequence (TAIR10)
(BLAST)
001: MGETVHCGSF LSSMRDLSED ISNTCSYSMY CGGDKTLPYG QYQNGFSARP PTDSYERDFL KQTMLEHEAV FKNQVYELHR LYRTQKSLMA EVKGKNFVDH
101: LNNNEPTPGS GIKRGFLFGN SICGEGSTSQ DCNVGKDNKV LEVRPVKVRR TMIDLQLPAD EYLHTEGDNT TCPPYEQSKE VGENIFFESH RNDSSGSSLL
201: MKNSNGFTDL NEPVQCQDSV PVSSSSRDLY SLYGANISHV QGQWVEKNTS QNGWMVLEAG NGKSTPRDKL CLPSHSVQVL SNSAFQPLGY PSTDHSKLSG
301: ERASFKCEVR QRNPEVSYDS YVESSVASNV PSLNHGYRPE SVRPWSHWIS SWENRSSSSV QKPLPLQANP FLTFNTQVRA DSSAEMRSRD SNGLNQGFSS
401: FSEESAFNFP SVNFNHLNNG PKGAVTNGSL CESVMHQSLK NLQGPKKQEC SSGLPWIKPK PLNKNGKTNG GLDLNASANH QFMDERDMGD SSNYVHPQNG
501: LRSVTCSNDA NLRHVEMANS QSRRKILGFP ISQKLSICEE HPSLITSSVC ISNEPKKVNN LVKINLDINL PCEASVSEGV VVDKEEGNKA ATHRQHIDLN
601: FCASEDEDSG FCSNPRVETK ATTLINVEAP LTLESEEEGG KFPEKRDEAG DSVDELIEAA AEAIVTISLS YHCRNTDEAA SSSTDAVDKE PLSWFVNTIA
701: SCGNDLESKI DACLEARDCE GCREECSSGE FDYFEAMTLN LTQTKEEDYM PKPLIPEYLK FDGTGSMGIT SNRPRRGQAR RGRPKRDFQR DILPGLASLS
801: RLEVTEDLQM FGGLMKATGY NWNSGMARRS SNRGRKRLVS NIDRAPVCSS LAQPMNNSSV QMVGLEDRSL TGWGNATRRP RRHRCPAGTP PTVLLT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)