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AT1G67880.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.745
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta-1,4-N-acetylglucosaminyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta-1,4-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: protein amino acid N-linked glycosylation; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 17 (InterPro:IPR006813); BEST Arabidopsis thaliana protein match is: beta-1,4-N-acetylglucosaminyltransferase family protein (TAIR:AT1G12990.1); Has 985 Blast hits to 984 proteins in 94 species: Archae - 0; Bacteria - 41; Metazoa - 63; Fungi - 34; Plants - 129; Viruses - 4; Other Eukaryotes - 714 (source: NCBI BLink).
Protein Annotations
CAZy:GT17eggNOG:ENOG410IEQJeggNOG:ENOG410YQKPEMBL:AC012563
EMBL:AK226493EMBL:AY080715EMBL:CP002684EMBL:KJ138950
EnsemblPlants:AT1G67880EnsemblPlants:AT1G67880.1entrez:843116GeneID:843116
GO:GO:0003830GO:GO:0006487GO:GO:0016021Gramene:AT1G67880.1
hmmpanther:PTHR12224hmmpanther:PTHR12224:SF1HOGENOM:HOG000239213InterPro:IPR006813
KEGG:00510+2.4.1.144KEGG:ath:AT1G67880KO:K00737OMA:HEIPHYH
PANTHER:PTHR12224Pfam:PF04724PhylomeDB:Q9C9V4PIR:E96701
Proteomes:UP000006548Reactome:R-ATH-975574RefSeq:NP_176955.1STRING:3702.AT1G67880.1
TAIR:AT1G67880TMHMM:TMhelixUniGene:At.35591unipathway:UPA00378
UniProt:Q9C9V4
Coordinates (TAIR10) chr1:-:25454081..25455453
Molecular Weight (calculated) 45881.40 Da
IEP (calculated) 7.91
GRAVY (calculated) -0.30
Length 390 amino acids
Sequence (TAIR10)
(BLAST)
001: MWWMMGENGG HYCSKKSDDL CGTQESDRGF GISRLCCILR GVDLKSVLFL LVIMPMCVLG VYINALKISY FLRPLWESPP KPFHEIPHYH HENASMESLC
101: KLHGWRTREY PRRVYDAVLF STEVELLTIR WKELYPYVTQ FVLLESNSTF TGLPKPLVFA GHRDEFKFIE PRLTYGSIGG RFKKGEKNPF YEEAYQRIAL
201: DQLLRIAGIT DDDLLIMSDV DEIPSRHTIN LLRWCDDIPQ ILHLRLKNYL YSFEFPVDDK SWRASVHRYQ TGKTRYAHYR QSDVILADSG WHCSFCFRRI
301: SEFVFKMKAY SHYDRVRFAH YLNPKRVQRV ICSGSDLFDM IPEEYTFKDI IGKMGPIPHS YSAVHLPAYL LENAERYKFL LPGNCLRDEE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)