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AT1G67850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.747
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF707)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 324 Blast hits to 323 proteins in 26 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJW1eggNOG:ENOG4111F1EEMBL:AF385745EMBL:AK317179
EMBL:AK317674EMBL:BT002230EMBL:CP002684EnsemblPlants:AT1G67850
EnsemblPlants:AT1G67850.1EnsemblPlants:AT1G67850.2entrez:843111GeneID:843111
GO:GO:0016021GO:GO:0016757Gramene:AT1G67850.1Gramene:AT1G67850.2
hmmpanther:PTHR31210hmmpanther:PTHR31210:SF7HOGENOM:HOG000242272InterPro:IPR007877
KEGG:ath:AT1G67850OMA:SEPRYLAPfam:PF05212PhylomeDB:Q94F37
Proteomes:UP000006548RefSeq:NP_564909.1RefSeq:NP_974102.1TAIR:AT1G67850
TMHMM:TMhelixUniGene:At.19151UniProt:Q94F37
Coordinates (TAIR10) chr1:+:25439204..25441904
Molecular Weight (calculated) 46021.60 Da
IEP (calculated) 7.91
GRAVY (calculated) -0.42
Length 404 amino acids
Sequence (TAIR10)
(BLAST)
001: MGIFSRSSIS RKSKDGMKII ATAFFGVTFG FLIGISFPSL SITKVSLPTN FLPSNDLSYI EEKGSKIATP ESHKAWSSSK GNDSSSSTPI DKSKIWVPSN
101: PRGAEMLPPG MVAAESDFYL RRLWGLPHED LKSEPRYLAT FTVGINQKAN IDACVKKFSE NFTIVLFHYD GRVTEWDEFE WSKTAIHISV RKQTKWWYAK
201: RFLHPDIVAR YDYIFVWDED LGVEHFNAEE YVKMVKKHGL EISQPGLEPN QGLTWQMTKR RGDMEVHKIT EERPGWCSDP HLPPCAAFVE IMAPVFSRNA
301: WRCVWHVIQN DLVHGWGLDF ALRRCVEPAH EKIGVVDSQW VVHQSFPSLG NQGEATDGKA PWQGVRDRCK KEWTMFQSRM ANAEKDYFKS LQVEGSSNST
401: ATTI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)