AT1G30640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G14350.2); Has 112792 Blast hits to 111447 proteins in 4260 species: Archae - 145; Bacteria - 14032; Metazoa - 41532; Fungi - 11959; Plants - 25354; Viruses - 416; Other Eukaryotes - 19354 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:10861297..10864700 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64914.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.55 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.74 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 562 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATEPTRSWF QIRQQKPDKS SPTKKGQEGN VKNLGRPPMN DAPSNATKQK VAAAKQYIEN HYKIQKKSLQ ERKERRSILE QNLADADVTV EDKMDILKNF 101: EKKEMEYMRL QRQKMGVDDF ELLSIIGRGA FGEVRICKEK STGSVYAMKK LKKSEMLRRG QVEHVKAERN VLAEVDSPFI VKLCYSFQDD EHLYLIMEYL 201: PGGDMMTLLM RKDTLREDET RFYVAQTILA IESIHKHNYV HRDIKPDNLL ITRNGHIKLS DFGLSKSLES KNFPDFKAEL VDRSTKPAAE HDRLSKPPSA 301: PRRTQQEQLL HWQQNRRTLA FSTVGTPDYI APEVLLKKGY GMECDWWSLG AIMFEMLVGF PPFYSEEPLA TCRKIVNWKT CLKFPDEAKL SIEVKDLIRR 401: LLCNVEQRLG TKGVHEIKAH PWFRGVEWER LYESNAPYIP QVKHELDTQN FEKFDEVPST CQTSSKSSPW RKMISSKDAN FLGYTFKNLE IVDEHHIPGM 501: AELKRKSKTA NKPSLKTLFE TPYPPSENQA LKDLLDSPIY SEGSRGSSGS PFSRPNQSQA RR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)