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AT3G57550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.993
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : guanylate kinase
Curator
Summary (TAIR10)
guanylate kinase
Computational
Description (TAIR10)
guanylate kinase (AGK2); CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 9901 Blast hits to 9873 proteins in 2764 species: Archae - 0; Bacteria - 5418; Metazoa - 1587; Fungi - 182; Plants - 205; Viruses - 105; Other Eukaryotes - 2404 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G57550-MONOMERBioCyc:ARA:GQT-1936-MONOMERBioGrid:10238EC:2.7.4.8
eggNOG:COG0194eggNOG:KOG0707EMBL:AF204676EMBL:AL133248
EMBL:BT002466EMBL:BT009693EMBL:CP002686EnsemblPlants:AT3G57550
EnsemblPlants:AT3G57550.1entrez:824922ExpressionAtlas:Q9M682Gene3D:2.120.10.80
Gene3D:3.40.50.300GeneID:824922Genevisible:Q9M682GO:GO:0004385
GO:GO:0005524GO:GO:0048229GO:GO:0048638gramene_pathway:2.7.4.8
gramene_pathway:DENOVOPURINE3-PWYhmmpanther:PTHR23117hmmpanther:PTHR23117:SF13HOGENOM:HOG000029159
InterPro:IPR008144InterPro:IPR008145InterPro:IPR011043InterPro:IPR015915
InterPro:IPR017665InterPro:IPR020590InterPro:IPR027417KEGG:00230+2.7.4.8
PaxDb:Q9M682Pfam:PF00625Pfam:Q9M682Pfscan:PS50052
PhylomeDB:Q9M682PIR:T46191PRIDE:Q9M682PRO:PR:Q9M682
PROSITE:PS00856PROSITE:PS50052ProteinModelPortal:Q9M682Proteomes:UP000006548
Reactome:R-ATH-499943RefSeq:NP_567051.1scanprosite:PS00856SMART:SM00072
SMR:Q9M682STRING:3702.AT3G57550.2SUPFAM:0047741SUPFAM:SSF50965
SUPFAM:SSF52540TAIR:AT3G57550tair10-symbols:AGK2tair10-symbols:GK-2
TIGRfam:TIGR03263TIGRFAMs:TIGR03263UniGene:At.717UniProt:Q9M682
Coordinates (TAIR10) chr3:+:21307269..21309193
Molecular Weight (calculated) 42555.20 Da
IEP (calculated) 8.22
GRAVY (calculated) -0.31
Length 389 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEAPAFFVD HLENGYTNGF GVKSEPKNRD TSVLIGDRSF VIGGNHEGNP LFLGVQIHDK VTNKWSSPSV LGTGPKPCKG YSAIVLPKGR ILVIKKGSAS
101: DDSIWFLEVD TPFIREQKKL LGREVVAWSK GVRGNAEKPI VISGPSGVGK GTLISMLMKE FPSMFGFSVS HTTRAPRCME KNGVHYHFTD KTVMEKEIKD
201: GKFLEFASVH GNLYGTSIES VEVVTDSGKR CILDIDVQGA RSVKASSLDA IFIFVCPPSM KELEDRLRAR GTETEEQIQK RLRNADAEIK AGKSSGIFEH
301: KLYNDNLEEC YKTLKNLLGI NDLAPVNGVE VEGINLPKEH TVTKMDDKIL IQETGEGTKN KMIVLDLSSI NGGAPGRTRG IVLDTVKSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)