AT5G08660.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.929 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF668) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF668); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1); Has 342 Blast hits to 276 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 333; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:2814526..2817845 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 72502.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.24 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.46 | ||||||||||||||||||||||||||||
| Length | 649 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSFCSKSLG INFGSEYSGS SVADDGREPD FGHSQPNGQT SLIVPGMRQL MVKDVKEQNQ LKDVFSFRER EAEDNFYDGI PTYTMAPSQK IRSAKSTQTA 101: VSKVTEASKL LGKAGLGRAK DVLDTLGSSM TDLSSGGFTS GVATKGNELG ILAFEVANTI VKSSNLIESL SKRNIEHLKG TILYSEGVQN LVSNDFDELL 201: RLVAADKRQE LQVFSGEVVR FGNRSKDFQW HNLQRYFDRI SKELTPQRQL KEDAVLVVDQ LMVLVQYTAE LYQELQVLYR LEKDYEQKRR EEENSANSSK 301: GDGLAILKTE LKAQRKVVKS LKKKSLWSRG FEEVMEKLVD IVHFLLLEIH NIFGGADDQP SKKGAAEYDK RLGPAGLALH YANIIVQIDT LVARASSITS 401: NARDSLYQSL PPGIKLALRS KIKSFNVDKE LSVTQIKDEM ERTLHWLVPV AGNTTKAHHG FGWVGEWANT GTDFTSKPSG GDILRIETLY HASKEKTEIY 501: ILGQIIWLQH LVTKAKSDAR GGPRLSSIKS PLDTTNQQLI SEPLSVPIVT DEEQKMLQEA SKRKRTPCVS KSQDFDSEYS RARKCDPLSK SSEYFRGVRR 601: SKSAAVKRYS SGFPLLDFAI DKEKVLDVID RVDVPRDYKA LLKEGSLSF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)