AT1G62480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.687 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Vacuolar calcium-binding protein-related | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Vacuolar calcium-binding protein-related; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 21787 Blast hits to 9668 proteins in 1087 species: Archae - 111; Bacteria - 3941; Metazoa - 6730; Fungi - 2179; Plants - 741; Viruses - 179; Other Eukaryotes - 7906 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:23128799..23129548 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 16629.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 3.70 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.70 | ||||||||||||||||||||||||
| Length | 152 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATIEVEQVT PVAAENIEVP PPKAVESEEV TTVSESLPAP VTESQAPVEV TTKDLVVEET EKPIEETEEA QVETPEVVEI KKDEEAPVET PVVVEDESKT 101: EEVVEAKKEE EVEEKKTEEA PVVVEEEKKP EAEEEKPAVE ASVTAPVEKA DE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)