AT1G12080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.950 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Vacuolar calcium-binding protein-related | ||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Vacuolar calcium-binding protein-related; Has 7161 Blast hits to 3135 proteins in 433 species: Archae - 55; Bacteria - 867; Metazoa - 2008; Fungi - 476; Plants - 327; Viruses - 233; Other Eukaryotes - 3195 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:4084289..4084888 | ||||||||||||||||
| Molecular Weight (calculated) | 11675.30 Da | ||||||||||||||||
| IEP (calculated) | 3.84 | ||||||||||||||||
| GRAVY (calculated) | -0.93 | ||||||||||||||||
| Length | 104 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATVEVEQVT PVAVENVEVP TKTVEETVVE TEKKDEETEK KTEEKDEKTE VITETPVVEE EEKKAEEVTE TPAVVEEEKK TEVVEEKQTE VAAAEEVAVE 101: KAEE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)