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AT1G61260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.494
plasma membrane 0.412
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF761)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1); Has 110 Blast hits to 108 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWHVeggNOG:ENOG410ZK5TEMBL:CP002684EnsemblPlants:AT1G61260
EnsemblPlants:AT1G61260.1entrez:842420GeneID:842420GO:GO:0016021
Gramene:AT1G61260.1hmmpanther:PTHR33098hmmpanther:PTHR33098:SF10InParanoid:F4HTI9
InterPro:IPR008480InterPro:IPR025520KEGG:ath:AT1G61260OMA:FRDRTNY
PaxDb:F4HTI9Pfam:PF05553Pfam:PF14364PRIDE:F4HTI9
Proteomes:UP000006548RefSeq:NP_176321.2TAIR:AT1G61260TMHMM:TMhelix
UniGene:At.10420UniProt:F4HTI9
Coordinates (TAIR10) chr1:-:22593756..22594986
Molecular Weight (calculated) 38879.40 Da
IEP (calculated) 5.04
GRAVY (calculated) -0.43
Length 344 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSWMMTTKA VLISSGVATV ALLLKLSVPV AVDFSVSRAP ILWSSLLSWL KPPYLYVVTN GIIITIVASS KYYRSHHDRD EEDEIVVYGG GGYKIQTEEP
101: IVNQHQASPR ILEVKDLDTG AHFGFVVANL EAEELESEAV TAVVFDDEEE EKKIIDSAAT AEDEIEEELK SVIMVENSDL VESDVIPPPM MIESENLPPI
201: EKPLVTSRFG HRKLMKASQE GGRALRVTKP KKNETLENTW KMITEGKSTP LTRQLYRRSD TFGRGDSGGV DGEVKPVYKK SDTFRDRTNY YQLAETAKVR
301: KEPSLSQEEL NRRVEAFIKK FNEEMKLQRM ESLRQYKEIT SRGV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)