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AT2G28080.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.984
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36970.1); Has 5722 Blast hits to 5664 proteins in 294 species: Archae - 0; Bacteria - 48; Metazoa - 520; Fungi - 23; Plants - 5076; Viruses - 28; Other Eukaryotes - 27 (source: NCBI BLink).
Protein Annotations
EC:2.4.1.-eggNOG:COG1819eggNOG:KOG1192EMBL:KJ138895
EnsemblPlants:AT2G28080EnsemblPlants:AT2G28080.1entrez:817352ExpressionAtlas:W8Q3F0
GeneID:817352GO:GO:0016758Gramene:AT2G28080.1gramene_pathway:2.4.1.-
gramene_pathway:2.4.1.203gramene_pathway:2.4.1.215gramene_pathway:PWY-2902hmmpanther:PTHR11926
hmmpanther:PTHR11926:SF333HOGENOM:HOG000237564InterPro:IPR002213KEGG:ath:AT2G28080
OMA:LLRIHGHPANTHER:PTHR11926PaxDb:W8Q3F0Pfam:PF00201
Pfam:Q9ZUV0PhylomeDB:W8Q3F0PRO:PR:Q9ZUV0PROSITE:PS00375
ProteinModelPortal:W8Q3F0RefSeq:NP_180375.1scanprosite:PS00375SMR:W8Q3F0
SUPFAM:SSF53756UniGene:At.38670UniProt:Q9ZUV0UniProt:W8Q3F0
Coordinates (TAIR10) chr2:-:11960774..11963227
Molecular Weight (calculated) 53369.70 Da
IEP (calculated) 6.19
GRAVY (calculated) 0.03
Length 482 amino acids
Sequence (TAIR10)
(BLAST)
001: MADVRNPTKN HHGHHHLHAL LIPYPFQGHV NPFVHLAIKL ASQGITVTFV NTHYIHHQIT NGSDGDIFAG VRSESGLDIR YATVSDGLPV GFDRSLNHDT
101: YQSSLLHVFY AHVEELVASL VGGDGGVNVM IADTFFVWPS VVARKFGLVC VSFWTEAALV FSLYYHMDLL RIHGHFGAQE TRSDLIDYIP GVAAINPKDT
201: ASYLQETDTS SVVHQIIFKA FEDVKKVDFV LCNTIQQFED KTIKALNTKI PFYAIGPIIP FNNQTGSVTT SLWSESDCTQ WLNTKPKSSV LYISFGSYAH
301: VTKKDLVEIA HGILLSKVNF VWVVRPDIVS SDETNPLPEG FETEAGDRGI VIPWCCQMTV LSHESVGGFL THCGWNSILE TIWCEVPVLC FPLLTDQVTN
401: RKLVVDDWEI GINLCEDKSD FGRDEVGRNI NRLMCGVSKE KIGRVKMSLE GAVRNSGSSS EMNLGLFIDG LLSKVGLSNG KA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)