AT1G21070.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:golgi 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Nucleotide-sugar transporter family protein | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Nucleotide-sugar transporter family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT1G76670.1); Has 2012 Blast hits to 2008 proteins in 220 species: Archae - 0; Bacteria - 26; Metazoa - 397; Fungi - 317; Plants - 1060; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:7376148..7377810 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 38046.20 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.62 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.53 | ||||||||||||||||||||||||||||||||||||
Length | 348 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEKAENEKKP SAVSDVGAWA MNVTSSVGII MANKQLMSSS GFGFSFATTL TGFHFALTAL VGMVSNATGL SASKHVPLWE LLWFSLVANI SIAAMNFSLM 101: LNSVGFYQIS KLSMIPVVCV MEWVLHSKHY SREVKASVMV VVVGVGICTV TDVKVNAKGF ICACTAVFST SLQQISIGSL QKKYSIGSFE LLSKTAPIQA 201: ISLLIFGPFV DYFLSGRFIS TYKMTYSAML CILLSCALAV FCNISQYLCI GRFSATSFQV LGHMKTVCVL TLGWLIFDSE MTFKNIAGMV LAVVGMVIYS 301: WAVELEKQRK SKVIPHGKHS MTEDEIKLLK EGIEHMDLKD MELGNNKA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)