AT4G22780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.868 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ACT domain repeat 7 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Member of a family of ACT domain containing proteins . ACT domains are involved in amino acid binding . | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ACT domain repeat 7 (ACR7); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 8 (TAIR:AT1G12420.1); Has 2549 Blast hits to 1855 proteins in 571 species: Archae - 0; Bacteria - 1517; Metazoa - 0; Fungi - 0; Plants - 619; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:11968696..11970956 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50692.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.00 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 449 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MELSDCSNEY EKLVVRMNMP RVVIDNGVCP NSTVVKIDSA RSPGILLESV QLLTDMNLWI KKAYISSDGK WNMDVFHVSD LNGDKLTDEN LIRYIEKSIE 101: TSHYCKTEGY TGLTALELTG TDRVGLLSEV FAVLADLECD VVEAKAWTHN GRIASMIYVK DGNSGTPIDG DSDRVQRVEG QLRNLLKADD GYQNDTRTCV 201: SYGGNTHMER RLHQRMFMDR DYEKKFDIEK SPIVSVQNLP KRGYSVVNLQ CKDRMKLLFD VVCTLTDMAY IVFHAAIRTV GETAFLEFYV RHSDGHPVSS 301: EPERQRLIQC LQAAIERRTV KGVRLELCTA DRPGLLAEVT RILRENGLNI ARAEISTKDS IARNVFYVTD ANGNLIDPEI IKSIREKIGI DDLSVKEPFP 401: ISCREAVEKE QHIEPQDHQG RYGGGTVLVS LGSLVMRNLY HLGLIKSYF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)