AT3G46930.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.554 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G58950.1); Has 131220 Blast hits to 129723 proteins in 5271 species: Archae - 120; Bacteria - 14071; Metazoa - 50237; Fungi - 12125; Plants - 33600; Viruses - 536; Other Eukaryotes - 20531 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:17286160..17288032 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53825.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.21 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 475 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDGEVTSWIR RANFSHTVCY RMITPSLESM PFTVNQEKMQ RNPVTNKKRS VSPLPHMALS DAFIEAKSDI KRFSTPHPRR VEPEKGMKAK SSSRKDSSEK 101: KSVNLRSLSH SGPIRDLSTQ KVKERGKSKI DKKSSKSVDY RGSKVSSAGV LEECLIDVSK LSYGDRFAHG KYSQIYHGEY EGKAVALKII TAPEDSDDIF 201: LGARLEKEFI VEATLLSRLS HPNVVKFVGV NTGNCIITEY VPRGSLRSYL HKLEQKSLPL EQLIDFGLDI AKGMEYIHSR EIVHQDLKPE NVLIDNDFHL 301: KIADFGIACE EEYCDVLGDN IGTYRWMAPE VLKRIPHGRK CDVYSFGLLL WEMVAGALPY EEMKFAEQIA YAVIYKKIRP VIPTDCPAAM KELIERCWSS 401: QTDKRPEFWQ IVKVLEHFKK SLTSEGKLNL LPSQICPELK KCPKFWIHIF GSFHHHSSGG GSSSNNSALP KPKFA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)