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AT1G61180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : LRR and NB-ARC domains-containing disease resistance protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response, apoptosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 24701 Blast hits to 21254 proteins in 830 species: Archae - 23; Bacteria - 2777; Metazoa - 4902; Fungi - 437; Plants - 15881; Viruses - 0; Other Eukaryotes - 681 (source: NCBI BLink).
Protein Annotations
BioGrid:27635eggNOG:COG4886eggNOG:KOG4658EMBL:AC002294
EMBL:AY054518EMBL:CP002684EnsemblPlants:AT1G61180EnsemblPlants:AT1G61180.1
entrez:842411ExpressionAtlas:Q940K0Gene3D:3.40.50.300Gene3D:3.80.10.10
GeneID:842411Genevisible:Q940K0GO:GO:0005524GO:GO:0006952
GO:GO:0043531hmmpanther:PTHR23155hmmpanther:PTHR23155:SF639HOGENOM:HOG000238348
InParanoid:Q940K0InterPro:IPR001611InterPro:IPR002182InterPro:IPR027417
InterPro:IPR032675iPTMnet:Q940K0ncoils:CoilPaxDb:Q940K0
Pfam:PF00931Pfam:PF13855Pfam:Q940K0PhylomeDB:Q940K0
PIR:F96637PRIDE:Q940K0PRO:PR:Q940K0ProteinModelPortal:Q940K0
Proteomes:UP000006548RefSeq:NP_176313.1SMR:Q940K0STRING:3702.AT1G61180.2
SUPFAM:SSF52058SUPFAM:SSF52540TAIR:AT1G61180UniGene:At.21819
UniGene:At.67768UniProt:Q940K0
Coordinates (TAIR10) chr1:+:22551486..22554330
Molecular Weight (calculated) 101679.00 Da
IEP (calculated) 5.74
GRAVY (calculated) -0.18
Length 889 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSCFSLQVS DQTLNRIFNC LIGKSYIRTL EKNLRALQRE MEDLRAIQHE VQNKVARDEA RHQRRLEAVQ VWLDRVNSVD IECKDLLSVT PVELQKLCLC
101: GLCSKYVCSS YKYGKKVFLL LEEVKKLNSE GNFDEVSQPP PRSEVEERPT QPTIGQEDML EKAWNRLMED GVGIMGLHGM GGVGKTTLFK KIHNKFAEIG
201: GTFDIVIWIV VSKGVMISKL QEDIAEKLHL CDDLWKNKNE SDKATDIHRV LKGKRFVLML DDIWEKVDLE AIGIPYPSEV NKCKVAFTTR SREVCGEMGD
301: HKPMQVNCLE PEDAWELFKN KVGDNTLSSD PVIVELAREV AQKCRGLPLA LNVIGETMSS KTMVQEWEHA IHVFNTSAAE FSDMQNKILP ILKYSYDSLG
401: DEHIKSCFLY CALFPEDGEI YNEKLIDYWI CEGFIGEDQV IKRARNKGYA MLGTLTRANL LTKVGTYYCV MHDVVREMAL WIASDFGKQK ENFVVQAGVG
501: LHEIPKVKDW GAVRKMSLMD NDIEEITCES KCSELTTLFL QSNKLKNLPG AFIRYMQKLV VLDLSYNRDF NKLPEQISGL VSLQFLDLSN TSIEHMPIGL
601: KELKKLTFLD LTYTDRLCSI SGISRLLSLR LLRLLGSKVH GDASVLKELQ QLQNLQELAI TVSAELISLD QRLAKLISNL CIEGFLQKPF DLSFLASMEN
701: LSSLRVENSY FSEIKCRESE TESSYLRINP KIPCFTNLSR LEIMKCHSMK DLTWILFAPN LVVLLIEDSR EVGEIINKEK ATNLTSITPF LKLEWLILYN
801: LPKLESIYWS PLPFPVLLTM DVSNCPKLRK LPLNATSVSK VEEFEIHMYP PPEQENELEW EDDDTKNRFL PSIKPYKYFV YPGMSFLTV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)