AT1G61310.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.929 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : LRR and NB-ARC domains-containing disease resistance protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:22613166..22615943 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 105068.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.35 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 925 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSCFSFQIA VGDQTMNRIF DCLIGKSYIR TLEQNLRALQ REMEDLRATQ HEVQNKVARE ESRHQQRLEA VQVWLDRVNS IDIECKDLLS VSPVELQKLC 101: LCGLCTKYVC SSYKYGKKVF LLLEEVKILK SEGNFDEVSQ PPPRSEVEER PTQPTIGQEE MLEKAWNRLM EDGVGIMGLH GMGGVGKTTL FKKIHNKFAE 201: IGGTFDIVIW IVVSQGAKLS KLQEDIAEKL HLCDDLWKNK NESDKATDIH RVLKGKRFVL MLDDIWEKVD LEAIGIPYPS EVNKCKVAFT TRSREVCGEM 301: GDHKPMQVNC LEPEDAWELF KNKVGDNTLS SDPVIVGLAR EVAQKCRGLP LALNVIGETM ASKTMVQEWE YAIDVLTRSA AEFSGMENKI LPILKYSYDS 401: LGDEHIKSCF LYCALFPEDG QIYTETLIDK LICEGFIGED QVIKRARNKG YAMLGTLTRA NLLTKVGTEL ANLLTKVSIY HCVMHDVVRE MALWIASDFG 501: KQKENFVVQA SAGLHEIPEV KDWGAVRRMS LMRNEIEEIT CESKCSELTT LFLQSNQLKN LSGEFIRYMQ KLVVLDLSDN RDFNELPEQI SGLVSLQYLD 601: LSFTRIEQLP VGLKELKKLT FLDLAYTARL CSISGISRLL SLRVLSLLGS KVHGDASVLK ELQQLENLQD LAITLSAELI SLDQRLAKVI SILGIEGFLQ 701: KPFDLSFLAS MENLSSLWVK NSYFSEIKCR ESETDSSYLH INPKIPCFTN LSRLDIVKCH SMKDLTWILF APNLVVLFIE DSREVGEIIN KEKATNLTSI 801: TPFLKLERLI LCYLPKLESI YWSPLPFPLL LNIDVEECPK LRKLPLNATS APKVEEFRIL MYPPELEWED EDTKNRFLPE MVSTSTSSKD PLLRNGIPRC 901: LKSESTLLLL ILLYLSSCRA FGLYN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)