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AT1G61190.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : LRR and NB-ARC domains-containing disease resistance protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG4658EMBL:AC002294EMBL:CP002684
EnsemblPlants:AT1G61190EnsemblPlants:AT1G61190.1entrez:842412Gene3D:3.40.50.300
Gene3D:3.80.10.10GeneID:842412Genevisible:O22727GO:GO:0005524
GO:GO:0006952GO:GO:0043531Gramene:AT1G61190.1hmmpanther:PTHR23155
hmmpanther:PTHR23155:SF639HOGENOM:HOG000238348InParanoid:O22727InterPro:IPR001611
InterPro:IPR002182InterPro:IPR027417InterPro:IPR032675iPTMnet:O22727
KEGG:ath:AT1G61190ncoils:CoilOMA:CGRMGDHPaxDb:O22727
Pfam:O22727Pfam:PF00931Pfam:PF13855PhylomeDB:O22727
PIR:G96637PRIDE:O22727PRO:PR:O22727ProteinModelPortal:O22727
Proteomes:UP000006548RefSeq:NP_176314.1SMR:O22727STRING:3702.AT1G61190.1
SUPFAM:SSF52058SUPFAM:SSF52540TAIR:AT1G61190UniGene:At.36514
UniGene:At.71478UniProt:O22727
Coordinates (TAIR10) chr1:+:22557602..22560687
Molecular Weight (calculated) 111538.00 Da
IEP (calculated) 6.65
GRAVY (calculated) -0.16
Length 967 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNFVCIEIS GDQMLDRIIR CLCGKGYIRN LEKNLRALQR EMEDLRATQH EVQNKVAREE SRHQQRLEAV QVWLDRVNSI DIECKDLLSV SPVELQKLCL
101: CGLCSKYVCS SYKYGKRVFL LLEEVTKLKS EGNFDEVSQP PPRSEVEERP TQPTIGQEEM LKKAWNRLME DGVGIMGLHG MGGVGKTTLF KKIHNKFAET
201: GGTFDIVIWI VVSQGAKLSK LQEDIAEKLH LCDDLWKNKN ESDKATDIHR VLKGKRFVLM LDDIWEKVDL EAIGIPYPSE VNKCKVAFTT RDQKVCGQMG
301: DHKPMQVKCL EPEDAWELFK NKVGDNTLRS DPVIVGLARE VAQKCRGLPL ALSCIGETMA SKTMVQEWEH AIDVLTRSAA EFSDMQNKIL PILKYSYDSL
401: EDEHIKSCFL YCALFPEDDK IDTKTLINKW ICEGFIGEDQ VIKRARNKGY EMLGTLIRAN LLTNDRGFVK WHVVMHDVVR EMALWIASDF GKQKENYVVR
501: ARVGLHEIPK VKDWGAVRRM SLMMNEIEEI TCESKCSELT TLFLQSNQLK NLSGEFIRYM QKLVVLDLSH NPDFNELPEQ ISGLVSLQYL DLSWTRIEQL
601: PVGLKELKKL IFLNLCFTER LCSISGISRL LSLRWLSLRE SNVHGDASVL KELQQLENLQ DLRITESAEL ISLDQRLAKL ISVLRIEGFL QKPFDLSFLA
701: SMENLYGLLV ENSYFSEINI KCRESETESS YLHINPKIPC FTNLTGLIIM KCHSMKDLTW ILFAPNLVNL DIRDSREVGE IINKEKAINL TSIITPFQKL
801: ERLFLYGLPK LESIYWSPLP FPLLSNIVVK YCPKLRKLPL NATSVPLVEE FEIRMDPPEQ ENELEWEDED TKNRFLPSIK PLVRRLKIHY SGMGFLNVKN
901: QNPRFFFYCF IYLLVVHLDC IIDLHSDTSG MCCVVHLDYV FHFPFVFPKT FCILFRLHFY TIKSLCV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)