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AT1G60260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta glucosidase 5
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta glucosidase 5 (BGLU5); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 4 (TAIR:AT1G60090.1).
Protein Annotations
BioCyc:ARA:AT1G60260-MONOMERCAZy:GH1EC:3.2.1.21eggNOG:COG2723
eggNOG:KOG0626EMBL:AC004473EMBL:AY080772EMBL:CP002684
EnsemblPlants:AT1G60260EnsemblPlants:AT1G60260.1entrez:3767578Gene3D:3.20.20.80
GeneID:3767578Genevisible:Q8RXN9GO:GO:0005975GO:GO:0008422
Gramene:AT1G60260.1hmmpanther:PTHR10353hmmpanther:PTHR10353:SF29HOGENOM:HOG000088630
InParanoid:Q8RXN9InterPro:IPR001360InterPro:IPR013781InterPro:IPR017853
InterPro:IPR033132KEGG:ath:AT1G60260PANTHER:PTHR10353PaxDb:Q8RXN9
Pfam:PF00232Pfam:Q8RXN9PIR:T02278PRIDE:Q8RXN9
PRINTS:PR00131PROSITE:PS00653ProteinModelPortal:Q8RXN9Proteomes:UP000006548
RefSeq:NP_176232.2scanprosite:PS00653SMR:Q8RXN9STRING:3702.AT1G60260.1
SUPFAM:SSF51445TAIR:AT1G60260tair10-symbols:BGLU5UniGene:At.36686
UniProt:Q8RXN9
Coordinates (TAIR10) chr1:-:22218879..22221394
Molecular Weight (calculated) 54163.70 Da
IEP (calculated) 6.74
GRAVY (calculated) -0.35
Length 478 amino acids
Sequence (TAIR10)
(BLAST)
001: MEQFFALFTI FLSFAFPGRC SDVFSRSDFP EGFLFGAGTS AYQWEGAAAE DGRKPSVWDT LCYSRNIGNG DVTCDGYHKY KEDVKLMVDT NLDAFRFSIS
101: WSRLIPNGRG SVNQKGLQFY KNLISELITH GIEPHVTLYH YDHPQYLEDE YGGWVNNMMI KDFTAYVDVC FREFGNYVKF WTTINEANVF TIGGYNDGDT
201: PPGRCSLPGK NCLLGNSSTE TYIVGHNLLL AHASASRLYK QKYKDKQGGS IGFGLYLMGL TPSTSSKDDA IATQRAKDFY FGWFLGPLIF GDYPDTMKRT
301: IGSRLPFAAS VTNIKFKPSI SGNPDFYSDM GAYVTYLGNF SVIEYPVAPW TMEAVLEYIK QSYDNPPVYI LENGTPMTQH KDTHRVEYMN AYIGGVLKSI
401: RNGSDTRGYF VWSFMDLFEL IGRYDYGYGL YSVNFSDPHR KRSPRLSAHW YSDFLKGKTS FLDSKGIKEL QSNFSSSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)