AT1G60270.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : beta glucosidase 6 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
beta glucosidase 6 (BGLU6); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 4 (TAIR:AT1G60090.1). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:22222266..22224257 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42588.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.08 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 379 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKTFALITI FLAFAFSGKC SDVFSRCDFP EGFVFGSSTS AYQWEGAVAE DGRKPSVWDR FCHSHNNQGN GDITCDGYHK YKEDVKLMVD TNLDAFRFSI 101: SWSRLIPNRR GPVNQKGLQF YKNLIQELVN HGIEPYVTLH HFDHPQYLED EYEGWLNHMI VEDFTAYADV CFREFGNHVK FWTTINEGNI FSIGGYNDGD 201: SPPGRCSIPG QNCLLGNSST EPYIVGHNLL LAHASVSRLY KQNYKDKQGG SIGFSILTIG FSPSTSSKDD AIATQRANDF FNGWMLGPLI YGDYPDTMKR 301: IVGSRMPVFS EEESEQVKGS SDYIGINHYL AASITNSKLK PSISGNPDFY SDMNVILSFF ANFSSSEYDV APWAIEAVL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)