AT1G55320.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:peroxisome 1.000 ASURE: peroxisome What is SUBAcon? |
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Experimental Localisations and PPI |
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FP Images |
onion epidermal cell layer (peroxisomal marker)
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : acyl-activating enzyme 18 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 28626 Blast hits to 28179 proteins in 2353 species: Archae - 768; Bacteria - 16970; Metazoa - 908; Fungi - 873; Plants - 384; Viruses - 0; Other Eukaryotes - 8723 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:20633371..20636659 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 81139.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.56 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 727 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MWKSIGELSC DDYVKAGLTL EDAKEFDKLV SDVITKAIET DPRDQWKALV DESVLKPWHP HPLHQLLYYS VYSNWDSSVH GPPLYWFPSL SQSKSTNLGK 101: LMEYHGPRLL GPSYKNPLES FELFRRFSVE HPEVYWSFVI DELSLVFHTP PRCILNKSKP EGTWLPDAVL NIAECCLMPS SHPKKEDDSV AVVWRNEGFD 201: DSPVNRMTIK ELREQVMLVA NAISGSFEKG DTIAIDMPMT VDAVIIYLAI ILAGCIVVSI ADSFAAKEIA TRLKISKAKG IFTQDYILRG GRRFPLYSRV 301: VEAAPSKVIV LPASGTELHV QLREQDVSWM DFLSNAKPHS SGENYYRPIY LPVESVINIL FSSGTTGEPK AIPWTQLSPI RSACDGWAHL DVQVGHTYCW 401: PTNLGWVMGP TLMFSCFLTG ATLALYSGSP LGRGFGKFVQ DAGVTVLGTV PSLVKTWKRT NCMEGLNWTK IKFFATTGEA SNVDDVLWLS SKADYKPVIE 501: CCGGTELASS YIIGSPLQPQ AFGAFSTPSM TTRIIIFDEN GVPYPDDQPC TGEVGLFPQH LGATDRLLNA NHDEVYFKGM PMYKETRLRR HGDIVKRTVG 601: GYYNVQGRAD DTMNLGGIKT SSIEIERVCD QADECISETA AVTLTPPNGG PELLVIFAVL KEGFKQQSGE ELKMKFSRTI QKDLNPLFKV SFVKIVPEFP 701: RTASSKLLRR VLRDQIKQEL LSLRSRI |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)