suba logo
AT1G55320.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
FP Images

onion epidermal cell layer (peroxisomal marker)

At1g-GFP-55320
(full-length)
RFP-peroxisomal markeroverlay

Images by John Bussel
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : acyl-activating enzyme 18
Curator
Summary (TAIR10)
Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.
Computational
Description (TAIR10)
acyl-activating enzyme 18 (AAE18); FUNCTIONS IN: catalytic activity, ligase activity; INVOLVED IN: metabolic process, auxin metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 17 (TAIR:AT5G23050.1); Has 28626 Blast hits to 28179 proteins in 2353 species: Archae - 768; Bacteria - 16970; Metazoa - 908; Fungi - 873; Plants - 384; Viruses - 0; Other Eukaryotes - 8723 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G55320-MONOMERBioCyc:ARA:GQT-1001-MONOMEREC:6.2.1.-eggNOG:COG0365
eggNOG:KOG1175EMBL:AC027034EMBL:AK117129EMBL:AY250845
EMBL:CP002684EnsemblPlants:AT1G55320EnsemblPlants:AT1G55320.1entrez:841977
GeneID:841977GO:GO:0005777GO:GO:0006631GO:GO:0009850
GO:GO:0016874gramene_pathway:6.2.1.1gramene_pathway:6.2.1.17gramene_pathway:PWY-3941
gramene_pathway:PWY66-162gramene_pathway:PWY66-21hmmpanther:PTHR24095hmmpanther:PTHR24095:SF153
HOGENOM:HOG000244278InterPro:IPR000873InterPro:IPR020845KEGG:ath:AT1G55320
OMA:PYWFPSPPaxDb:Q84P17Pfam:PF00501Pfam:PF13193
Pfam:Q84P17PhylomeDB:Q84P17PIR:D96595PRIDE:Q84P17
PRO:PR:Q84P17PROSITE:PS00455ProteinModelPortal:Q84P17Proteomes:UP000006548
Reactome:R-ATH-177128Reactome:R-ATH-177135Reactome:R-ATH-177162Reactome:R-ATH-77111
RefSeq:NP_001077723.1RefSeq:NP_175929.3scanprosite:PS00455SMR:Q84P17
STRING:3702.AT1G55320.1SUPFAM:SSF56801TAIR:AT1G55320tair10-symbols:AAE18
TMHMM:TMhelixUniGene:At.17730UniProt:Q84P17
Coordinates (TAIR10) chr1:+:20633371..20636659
Molecular Weight (calculated) 81139.50 Da
IEP (calculated) 6.56
GRAVY (calculated) -0.14
Length 727 amino acids
Sequence (TAIR10)
(BLAST)
001: MWKSIGELSC DDYVKAGLTL EDAKEFDKLV SDVITKAIET DPRDQWKALV DESVLKPWHP HPLHQLLYYS VYSNWDSSVH GPPLYWFPSL SQSKSTNLGK
101: LMEYHGPRLL GPSYKNPLES FELFRRFSVE HPEVYWSFVI DELSLVFHTP PRCILNKSKP EGTWLPDAVL NIAECCLMPS SHPKKEDDSV AVVWRNEGFD
201: DSPVNRMTIK ELREQVMLVA NAISGSFEKG DTIAIDMPMT VDAVIIYLAI ILAGCIVVSI ADSFAAKEIA TRLKISKAKG IFTQDYILRG GRRFPLYSRV
301: VEAAPSKVIV LPASGTELHV QLREQDVSWM DFLSNAKPHS SGENYYRPIY LPVESVINIL FSSGTTGEPK AIPWTQLSPI RSACDGWAHL DVQVGHTYCW
401: PTNLGWVMGP TLMFSCFLTG ATLALYSGSP LGRGFGKFVQ DAGVTVLGTV PSLVKTWKRT NCMEGLNWTK IKFFATTGEA SNVDDVLWLS SKADYKPVIE
501: CCGGTELASS YIIGSPLQPQ AFGAFSTPSM TTRIIIFDEN GVPYPDDQPC TGEVGLFPQH LGATDRLLNA NHDEVYFKGM PMYKETRLRR HGDIVKRTVG
601: GYYNVQGRAD DTMNLGGIKT SSIEIERVCD QADECISETA AVTLTPPNGG PELLVIFAVL KEGFKQQSGE ELKMKFSRTI QKDLNPLFKV SFVKIVPEFP
701: RTASSKLLRR VLRDQIKQEL LSLRSRI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)