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AT1G54510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NIMA-related serine/threonine kinase 1
Curator
Summary (TAIR10)
Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.
Computational
Description (TAIR10)
NIMA-related serine/threonine kinase 1 (NEK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2); Has 126786 Blast hits to 124499 proteins in 4540 species: Archae - 112; Bacteria - 14456; Metazoa - 47155; Fungi - 12426; Plants - 31152; Viruses - 487; Other Eukaryotes - 20998 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G54510-MONOMERBioCyc:ARA:GQT-1229-MONOMERBioCyc:ARA:GQT-1230-MONOMEREC:2.7.11.1
eggNOG:ENOG410Y7JFeggNOG:KOG0589EMBL:AC005287EMBL:BX816613
EMBL:CP002684EnsemblPlants:AT1G54510EnsemblPlants:AT1G54510.1EnsemblPlants:AT1G54510.2
EnsemblPlants:AT1G54510.3entrez:841893GeneID:841893Genevisible:Q9SLI2
GO:GO:0004674GO:GO:0005524GO:GO:0006468Gramene:AT1G54510.1
Gramene:AT1G54510.2Gramene:AT1G54510.3hmmpanther:PTHR24362hmmpanther:PTHR24362:SF255
HOGENOM:HOG000238503InParanoid:Q9SLI2InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT1G54510KO:K08857
OMA:PEYSINEPaxDb:Q9SLI2Pfam:PF00069Pfam:Q9SLI2
Pfscan:PS50011PhylomeDB:Q9SLI2PIR:A96587PIR:B96587
PRIDE:Q9SLI2PRO:PR:Q9SLI2PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q9SLI2Proteomes:UP000006548Reactome:R-ATH-179409
RefSeq:NP_001185224.1RefSeq:NP_001185225.1RefSeq:NP_175853.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9SLI2STRING:3702.AT1G54510.1
SUPFAM:SSF56112TAIR:AT1G54510tair10-symbols:ATNEK1tair10-symbols:NEK1
UniGene:At.37203UniProt:Q9SLI2
Coordinates (TAIR10) chr1:-:20358603..20362006
Molecular Weight (calculated) 68840.00 Da
IEP (calculated) 9.94
GRAVY (calculated) -0.45
Length 612 amino acids
Sequence (TAIR10)
(BLAST)
001: MEQYEFLEQI GKGSFGSALL VRHKHEKKKY VLKKIRLARQ TQRTRRSAHQ EMELISKMRH PFIVEYKDSW VEKACYVCIV IGYCEGGDMA QAIKKSNGVH
101: FQEEKLCKWL VQLLMGLEYL HSNHILHRDV KCSNIFLTKE QDIRLGDFGL AKILTSDDLT SSVVGTPSYM CPELLADIPY GSKSDIWSLG CCIYEMAYLK
201: PAFKAFDMQA LINKINKTIV SPLPAKYSGP FRGLVKSMLR KNPEVRPSAS DLLRHPHLQP YVLDVKLRLN NLRRKTLPPE LPSSKRIMKK AHFSEPAVTC
301: PAFGERQHRS LWNDRALNPE AEEDTASSIK CISRRISDLS IESSSKGTLI CKQVSSSACK VSKYPLAKSS VTSRRIMETG RRSDHLHPVS GGGTTSKIIP
401: SARRTSLPLT KRATNQEVAA YNPIVGILQN VKSPEYSINE PQVDKIAIFP LAPYEQDIFF TPMQRKTSSK SSSVSDRSIT KDKCTVQTHT TWQGIQLNMV
501: DNISDGSSSS DQNATAGASS HTTSSSSRRC RFDPSSYRQR ADALEGLLEF SARLLQEGRY DELNVLLKPF GPGKVSPRET AIWIAKSLKE NRDKTKMVDL
601: NVSREIPHVG LL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)