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AT1G51620.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.989
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51805.1); Has 93958 Blast hits to 93187 proteins in 2925 species: Archae - 81; Bacteria - 9250; Metazoa - 34141; Fungi - 7343; Plants - 29758; Viruses - 205; Other Eukaryotes - 13180 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:BT028903EMBL:CP002684
EnsemblPlants:AT1G51620EnsemblPlants:AT1G51620.1entrez:841587ExpressionAtlas:Q0IGL7
GeneID:841587GO:GO:0004672GO:GO:0005524Gramene:AT1G51620.1
hmmpanther:PTHR27003hmmpanther:PTHR27003:SF44HOGENOM:HOG000116550InterPro:IPR000719
InterPro:IPR001245InterPro:IPR011009Pfam:PF07714Pfscan:PS50011
PROSITE:PS50011Proteomes:UP000006548RefSeq:NP_175573.2SMR:Q0IGL7
STRING:3702.AT1G51620.2SUPFAM:SSF56112TAIR:AT1G51620UniGene:At.49971
UniProt:Q0IGL7
Coordinates (TAIR10) chr1:+:19140536..19141638
Molecular Weight (calculated) 29751.50 Da
IEP (calculated) 7.01
GRAVY (calculated) -0.36
Length 262 amino acids
Sequence (TAIR10)
(BLAST)
001: MLNRASIYNI VQFTKEVHDF VKVRHKNLVS LIGYCDDGEH LALIYEFVAN GDLNDQLSGK FGNVPSWETR LKIIIGVAQG LEYLHSELRI LHRYVKPTNI
101: LLGENFEAKL ADFGLSRSSP TNPDIQASNK IYVKPGRDPY LHHQYFNSNR LNQTSDIYSF GIVMLEMITN QPVVDNKRES PHISKWVDLK VAKGDTLEIV
201: DLRLNNDFER DSVRKAMDIA CSCAARAHNR PSMSQVVIEL NECLALEMAR SNGRTGETTQ TQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)