suba logo
AT1G50310.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sugar transporter 9
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
sugar transporter 9 (STP9); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G19940.1); Has 30575 Blast hits to 30066 proteins in 2124 species: Archae - 552; Bacteria - 14756; Metazoa - 4448; Fungi - 7008; Plants - 2406; Viruses - 0; Other Eukaryotes - 1405 (source: NCBI BLink).
Protein Annotations
BioGrid:26678eggNOG:ENOG410XNQKeggNOG:KOG0254EMBL:AC007980
EMBL:AJ001662EMBL:AJ344336EMBL:CP002684EnsemblPlants:AT1G50310
EnsemblPlants:AT1G50310.1entrez:841453GeneID:841453Genevisible:Q9SX48
GO:GO:0005351GO:GO:0005355GO:GO:0005887GO:GO:0015992
GO:GO:0035428GO:GO:0046323GO:GO:1904659Gramene:AT1G50310.1
hmmpanther:PTHR23500hmmpanther:PTHR23500:SF47HOGENOM:HOG000202867InParanoid:Q9SX48
InterPro:IPR003663InterPro:IPR005828InterPro:IPR005829InterPro:IPR020846
KEGG:ath:AT1G50310OMA:MHEARREPaxDb:Q9SX48Pfam:PF00083
Pfam:Q9SX48Pfscan:PS50850PhylomeDB:Q9SX48PIR:D96539
PRIDE:Q9SX48PRINTS:PR00171PRO:PR:Q9SX48PROSITE:PS00216
PROSITE:PS00217PROSITE:PS50850ProteinModelPortal:Q9SX48Proteomes:UP000006548
RefSeq:NP_175449.1scanprosite:PS00216scanprosite:PS00217SMR:Q9SX48
STRING:3702.AT1G50310.1SUPFAM:SSF103473TAIR:AT1G50310tair10-symbols:ATSTP9
tair10-symbols:STP9TIGRfam:TIGR00879TIGRFAMs:TIGR00879TMHMM:TMhelix
UniGene:At.26446UniProt:Q9SX48
Coordinates (TAIR10) chr1:+:18635984..18638110
Molecular Weight (calculated) 56283.30 Da
IEP (calculated) 6.75
GRAVY (calculated) 0.50
Length 517 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGGAFVSEG GGGGNSYEGG VTVFVIMTCI VAAMGGLLFG YDLGISGGVT SMEEFLSKFF PEVDKQMHEA RRETAYCKFD NQLLQLFTSS LYLAALASSF
101: VASAVTRKYG RKISMFVGGV AFLIGSLFNA FATNVAMLIV GRLLLGVGVG FANQSTPVYL SEMAPAKIRG ALNIGFQMAI TIGILIANLI NYGTSQMAKN
201: GWRVSLGLAA VPAVIMVIGS FVLPDTPNSM LERGKYEQAR EMLQKIRGAD NVDEEFQDLC DACEAAKKVD NPWKNIFQQA KYRPALVFCS AIPFFQQITG
301: INVIMFYAPV LFKTLGFADD ASLISAVITG AVNVVSTLVS IYAVDRYGRR ILFLEGGIQM IVSQIVVGTL IGMKFGTTGS GTLTPATADW ILAFICLYVA
401: GFAWSWGPLG WLVPSEICPL EIRPAGQAIN VSVNMFFTFL IGQFFLTMLC HMKFGLFYFF GGMVAVMTVF IYFLLPETKG VPIEEMGRVW KQHPFWKRYM
501: PDDAVIGGGE ENYVKEV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)