AT2G25540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cellulose synthase 10 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
cellulose synthase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cellulose synthase 10 (CESA10); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: cellulose biosynthetic process, plant-type cell wall biogenesis; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, LP.02 two leaves visible, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 1 (TAIR:AT4G32410.1); Has 3087 Blast hits to 2785 proteins in 625 species: Archae - 12; Bacteria - 1099; Metazoa - 3; Fungi - 17; Plants - 1873; Viruses - 3; Other Eukaryotes - 80 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10867070..10872077 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 120623.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.55 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1065 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MVAGSYRRYE FVRNRDDSDD GLKPLKDLNG QICQICGDDV GLTKTGNVFV ACNECGFPLC QSCYEYERKD GSQCCPQCKA RFRRHNGSPR VEVDEKEDDV 0101: NDIENEFDYT QGNNKARLPH RAEEFSSSSR HEESLPVSLL THGHPVSGEI PTPDRNATLS PCIDPQLPGI YQLLLLPVRI LDPSKDLNSY GLVNVDWKKR 0201: IQGWKLKQDK NMIHMTGKYH EGKGGEFEGT GSNGDELQMV DDARLPMSRV VHFPSARMTP YRIVIVLRLI ILGVFLHYRT THPVKDAYAL WLTSVICEIW 0301: FAFSWLLDQF PKWYPINRET FLDRLALRYD RDGEPSQLAP VDVFVSTVDP MKEPPLVTAN TVLSILAVDY PVDKVACYVS DDGSAMLTFE ALSETAEFSK 0401: KWVPFCKKFN IEPRAPEFYF SQKIDYLKDK IQPSFVKERR AMKREYEEFK VRINILVAKA QKIPEDGWTM EDGTSWPGNN PRDHPGMIQV FLGHSGGLDT 0501: DGNELPRLIY VSREKRPGFQ HHKKAGAMNA LIRVSAVLTN GAYLLNVDCD HYFNNSKAIK EAMCFMMDPA IGKKCCYVQF PQRFDGIDLH DRYANRNTVF 0601: FDINLKGLDG IQGPVYVGTG CCFNRQALYG YDPVLTEEDL EPNIIVKSCF GSRKKGKSRK IPNYEDNRSI KRSDSNVPLF NMEDIDEDVE GYEDEMSLLV 0701: SQKRLEKRFG QSPVFIAATF MEQGGLPSTT NPLTLLKEAI HVISCGYEAK TDWGKEIGWI YGSVTEDILT GFKMHARGWI SIYCVPSRPA FKGSAPINLS 0801: DRLNQVLRWA LGSIEILLSR HCPIWYGYNG RLKLLERIAY INTIVYPITS IPLLAYCMLP AFCLITNTFI IPEISNLASL CFMLLFASIY ASAILELKWS 0901: DVALEDWWRN EQFWVIGGTS AHLFAVFQGL LKVFAGIDTN FTVTSKASDE DGDFAELYVF KWTSLLIPPT TILLVNLVGI VAGVSYAINS GYQSWGPLMG 1001: KLLFAFWVVA HLYPFLKGLL GRQNRTPTIV IVWSALLASI FSLLWVRINP FVSTTGVMSN SFMGE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)