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AT3G26790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AP2/B3-like transcriptional factor family protein
Curator
Summary (TAIR10)
Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.
Computational
Description (TAIR10)
FUSCA 3 (FUS3); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G24650.1); Has 875 Blast hits to 861 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 7; Plants - 523; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink).
Protein Annotations
BioGrid:7623eggNOG:ENOG410IWFVeggNOG:ENOG410YR6EEMBL:AB016889
EMBL:AF016264EMBL:AF016265EMBL:AJ630497EMBL:AY568669
EMBL:CP002686EnsemblPlants:AT3G26790EnsemblPlants:AT3G26790.1entrez:822293
Gene3D:2.40.330.10GeneID:822293Genevisible:Q9LW31GO:GO:0003677
GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0008284
GO:GO:0009733GO:GO:0009793GO:GO:0010116GO:GO:0010262
GO:GO:0010373Gramene:AT3G26790.1hmmpanther:PTHR31140hmmpanther:PTHR31140:SF10
HOGENOM:HOG000112670InParanoid:Q9LW31InterPro:IPR003340InterPro:IPR015300
iPTMnet:Q9LW31KEGG:ath:AT3G26790OMA:VNAHGLQPaxDb:Q9LW31
Pfam:PF02362Pfam:Q9LW31Pfscan:PS50863PhylomeDB:Q9LW31
PRIDE:Q9LW31PRO:PR:Q9LW31PROSITE:PS50863ProteinModelPortal:Q9LW31
Proteomes:UP000006548RefSeq:NP_566799.1SMART:SM01019SMR:Q9LW31
STRING:3702.AT3G26790.1SUPFAM:SSF101936TAIR:AT3G26790tair10-symbols:FUS3
UniGene:At.6029UniGene:At.66989UniProt:Q9LW31
Coordinates (TAIR10) chr3:-:9854025..9855748
Molecular Weight (calculated) 35617.60 Da
IEP (calculated) 5.55
GRAVY (calculated) -0.58
Length 313 amino acids
Sequence (TAIR10)
(BLAST)
001: MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD
101: VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD
201: VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG
301: LGSVENISLD DFY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)