AT1G47200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : WPP domain protein 2 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary for NE targeting of WPP1. RNAi suppression of WPP2 resulted in reduced mitotic activity. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
WPP domain protein 2 (WPP2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis, lateral root development; LOCATED IN: plasma membrane, nuclear outer membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: WPP domain protein 1 (TAIR:AT5G43070.1); Has 150 Blast hits to 150 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 5; Plants - 136; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:17298181..17298723 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 19134.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.16 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.68 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 180 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAETAETINT TISSPPPESE SSTTISAMTD PTSQEAASKD TDLTKEAESE KKPGGISLRI WPPTQKTRDA VLNRLIETLS TESILSKRYG TLKSDDATTV 101: AKLIEEEAYG VASNAVSSDD DGIKILELYS KEISKRMLES VKARSNASVG NGSVEDANTD ASEVSKDDAG PASEEEKSEA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)