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AT1G47750.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : peroxin 11A
Curator
Summary (TAIR10)
member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.
Computational
Description (TAIR10)
peroxin 11A (PEX11A); CONTAINS InterPro DOMAIN/s: Peroxisomal biogenesis factor 11 (InterPro:IPR008733); BEST Arabidopsis thaliana protein match is: peroxin 11B (TAIR:AT3G47430.1); Has 271 Blast hits to 271 proteins in 59 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 15; Plants - 188; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Protein Annotations
BioGrid:26411eggNOG:ENOG4111NS6eggNOG:KOG4186EMBL:AC012463
EMBL:AJ520106EMBL:AK227048EMBL:AY084249EMBL:BT024474
EMBL:CP002684EnsemblPlants:AT1G47750EnsemblPlants:AT1G47750.1entrez:841186
GeneID:841186Genevisible:Q9FZF1GO:GO:0005777GO:GO:0005779
GO:GO:0007031GO:GO:0016559GO:GO:0042802GO:GO:0044375
Gramene:AT1G47750.1hmmpanther:PTHR12652hmmpanther:PTHR12652:SF10HOGENOM:HOG000239990
InParanoid:Q9FZF1InterPro:IPR008733KEGG:ath:AT1G47750OMA:FVEQFIW
PaxDb:Q9FZF1Pfam:PF05648Pfam:Q9FZF1PhylomeDB:Q9FZF1
PIR:B96518PRIDE:Q9FZF1PRO:PR:Q9FZF1Proteomes:UP000006548
RefSeq:NP_564514.1STRING:3702.AT1G47750.1TAIR:AT1G47750tair10-symbols:PEX11A
TCDB:1.A.101.1.3TCDB:3.A.20.1.2TMHMM:TMhelixUniGene:At.21602
UniGene:At.71161UniProt:Q9FZF1
Coordinates (TAIR10) chr1:-:17569388..17570134
Molecular Weight (calculated) 27678.80 Da
IEP (calculated) 9.90
GRAVY (calculated) -0.07
Length 248 amino acids
Sequence (TAIR10)
(BLAST)
001: MATKAPEKIT KPKDRDFLNH LETYLSKRDG VDKLLKISRY ATKIILASSL IPETRSIIPR LKSFESSVGV SRKAFRLGKF VQDINALRSS RWDSNHELVL
101: LIIAYGGEGL YYFVEQFIWL TKSGLIDAKH SKWLQKISAW AELVGYVGSV SIKIRDLRKL NDEESCVAST IEISVSRGLA CDGEDEKMKM IKEKKTLKVL
201: SILQDLADGL MTIADIRDGK GVLSAPNVIS SAGLFSAIVS THKNWISC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)