AT1G45160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.969 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G17850.1); Has 126096 Blast hits to 124371 proteins in 4582 species: Archae - 166; Bacteria - 15020; Metazoa - 47097; Fungi - 12526; Plants - 29423; Viruses - 526; Other Eukaryotes - 21338 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:17084115..17090277 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 118003.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.23 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.51 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 1042 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MAEENRKDRG VSSTVAIPSG LNRIKTRLAS SGPRPEDSSD TVLKPPFNRN QKTIVPRGHG RTTGSSKQER KGTKLSRWLA SYKPKYSCHP PKYACSSTTS 0101: SEEIKLRGKN SGKDEEKMIK ISETNPPCSK SMGIKSFSHE LGPRGGVQTP YPRPHSYNDL KELLGSLHSR FDVAKETVDK KLDVFVRDVK EAMEKMDPSC 0201: PEDREMAEQL LDVARACMEM TSAQLRATCE SIVQDLTRKR KQCQAGLVKW LFSQLLFILT HCTRVVMFQK ETEPIDESSF RKFKECLERI PALETDWGST 0301: PRVDDSGSGY PEYQRNEAGQ KFKRRDKESL ESETALDYVV PNDHGNNAAR EGYAAAKQEF PSHEPQFDSK VVEQRFYLSD EYEDKMSNEP GKELGGSDYV 0401: ICRICEEEVP LFHLEPHSYI CAYADKCEIN CVDVDERLLK LEEILEQIID SRSLNSFTQA GGLENSVLRK SGVASEGCSP KINEWRNKGL EGMFEDLHEM 0501: DTAFIDESYT YPIHLKSHVG AKFCHHATSS STGSITSVSS TNTPRTSHFD SYWLERHCPE QEDLRLMMDL SDIARCGAST DFSKEGSCDY IMACMQDIQA 0601: VLKQGKLKAL VIDTFGGRIE KLLCEKYLHA RELTADKSSV GNIKESEDVL EHASATPQLL LKDRISIDDF EIIKPISRGA FGKVFLARKR TTGDFFAIKV 0701: LKKLDMIRKN DIERILQERN ILITVRYPFL VRFFYSFTCR DNLYLVMEYL NGGDLYSLLQ KVGCLDEEIA RIYIAELVLA LEYLHSLKIV HRDLKPDNLL 0801: IAYNGHIKLT DFGLSKIGLI NNTIDLSGHE SDVSPRTNSH HFQKNQEEER IRHSAVGTPD YLAPEILLGT EHGYAADWWS AGIVLFELLT GIPPFTASRP 0901: EKIFDNILNG KMPWPDVPGE MSYEAQDLIN RLLVHEPEKR LGANGAAEVK SHPFFQGVDW ENLALQKAAF VPQPESINDT SYFVSRFSES SCSDTETGNN 1001: SGSNPDSGDE VGIWKLHPFL SRYSICNHRI YRKLFFLLLC VF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)