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AT1G35510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.834
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : O-fucosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-fucosyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G01480.1); Has 838 Blast hits to 827 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJW8eggNOG:ENOG410XT6ZEMBL:AY150442EMBL:CP002684
EnsemblPlants:AT1G35510EnsemblPlants:AT1G35510.1entrez:840444GeneID:840444
GO:GO:0016021GO:GO:0016757Gramene:AT1G35510.1hmmpanther:PTHR31288
hmmpanther:PTHR31288:SF8HOGENOM:HOG000240134InterPro:IPR019378InterPro:IPR024709
KEGG:00514+2.4.1.221KEGG:ath:AT1G35510OMA:YSSPNHYPfam:PF10250
PhylomeDB:Q8H1E6PIRSF:PIRSF009360Proteomes:UP000006548RefSeq:NP_564461.1
STRING:3702.AT1G35510.1TAIR:AT1G35510TMHMM:TMhelixUniGene:At.21564
unipathway:UPA00378UniProt:Q8H1E6
Coordinates (TAIR10) chr1:+:13071486..13074675
Molecular Weight (calculated) 63769.90 Da
IEP (calculated) 10.15
GRAVY (calculated) -0.16
Length 568 amino acids
Sequence (TAIR10)
(BLAST)
001: MHGLSRLGNG SSNGRINIPS PSPPSSPRIR HTRGKSLAGG VYKQGLGERL VFLLFSIVFR RKGVLLLAPL LYIAGMLLFM GSFGFTVLDL GHGVEIVYRR
101: GSPGSVYRSP KVFKRLWPVM EADVNGSSHN VLMEAWKPRV KSVWKPCIST NVSAAGSNSN GYFIIEANGG LNQQRLSICD AVAVAGLLNA TLVIPIFHLN
201: SVWRDSSKFG DIFDEDFFIY ALSKNVNVVK ELPKDVLERY NYNISSIVNL RLKAWSSPAY YLQKVLPQLL RLGAVRVAPF SNRLAHAVPA HIQGLRCLAN
301: FEALRFAEPI RLLAEKMVDR MVTKSVESGG KYVSVHLRFE MDMVAFSCCE YDFGQAEKLE MDMARERGWK GKFRRRGRVI RPGANRIDGK CPLTPLEVGM
401: MLRGMGFNNS TLVYVAAGNI YKADKYMAPL RQMFPLLQTK DTLATPEELA PFKGHSSRLA ALDYTVCLHS EVFVSTQGGN FPHFLIGHRR YLYKGHAETI
501: KPDKRKLVQL LDKPSIRWDY FKKQMQDMLR HNDAKGVELR KPAASLYTFP MPDCMCKEPD PEPETDPA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)