AT1G34340.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.680 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G49950.1); Has 2391 Blast hits to 2388 proteins in 904 species: Archae - 0; Bacteria - 1410; Metazoa - 329; Fungi - 194; Plants - 136; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:12530936..12534031 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 59673.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.12 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||
| Length | 530 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEEDLILSP SPYDLLFQAL TLIPIRHYLI ALFVLCTIFF YNFVEFHFLG DAILRYFRCR VNLIYNPDSP LYHGVVSRCQ ILHGRYVATP WLASPHIQTC 101: FLNFHGLPPV FTYTRQLFLT SDGGTIALDW LTNSDVLDGS LHNKSEITKE DTTPIAVVIP GLTSDSSSAY LKHLAYDTAK TGWNVVISNH RGLGGVSVTS 201: DCFYNAGWTD DIRVVLDYLQ HKYPRAPLFA IGTSIGANVL VKYLGEEGEK TPLRGAVAIC SPWDLLIGDR FICRTLKQKL YDKALTIGLQ GYAQLHEPQF 301: LRLANWEGIK KSRSIRDFDN HATCLVGKFE TVDTYYRKSS STQYVGNVAV PLLCISALDD PLCTKEAIPW DECRANKNIV LATTNHGGHL AFFEGLTGSS 401: LWWVRATNEF LGVLSCSPYM HIQKIVDKRS SGSGKQEPSI NQGPYLNIAE DGLVAAVKYE QDTNKTTLKQ RGRKPEEDVT KKSFKELCRQ TKQSVWWLGY 501: IGMVTSFPLL GMLLNYIFRK KQRPTTTSTS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)