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AT2G14255.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.918
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Ankyrin repeat family protein with DHHC zinc finger domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Ankyrin repeat family protein with DHHC zinc finger domain; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT5G20350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:30135BRENDA:2.3.1.225EC:2.3.1.225eggNOG:COG0666
eggNOG:COG5273eggNOG:KOG0509EMBL:AC006304EMBL:BT030047
EMBL:CP002685EnsemblPlants:AT2G14255EnsemblPlants:AT2G14255.1entrez:2745525
Gene3D:1.25.40.20GeneID:2745525Genevisible:Q3EC11GO:GO:0000139
GO:GO:0005794GO:GO:0008270GO:GO:0016021GO:GO:0019706
hmmpanther:PTHR22883hmmpanther:PTHR22883:SF70HOGENOM:HOG000243854InParanoid:Q3EC11
InterPro:IPR001594InterPro:IPR002110InterPro:IPR020683KEGG:ath:AT2G14255
OMA:DIDIDHRPaxDb:Q3EC11Pfam:PF01529Pfam:PF12796
Pfam:Q3EC11Pfscan:PS50088Pfscan:PS50216Pfscan:PS50297
PhylomeDB:Q3EC11PIR:D84515PRIDE:Q3EC11PRO:PR:Q3EC11
PROSITE:PS50088PROSITE:PS50216PROSITE:PS50297ProteinModelPortal:Q3EC11
Proteomes:UP000006548RefSeq:NP_973453.2SMART:SM00248SMR:Q3EC11
STRING:3702.AT2G14255.1SUPFAM:SSF48403TAIR:AT2G14255TMHMM:TMhelix
UniGene:At.40568UniProt:Q3EC11
Coordinates (TAIR10) chr2:+:6036974..6040892
Molecular Weight (calculated) 59990.80 Da
IEP (calculated) 7.88
GRAVY (calculated) -0.08
Length 536 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSSEIEVVP LDSNSHQSPT ESPTITDVFS ASAYGDLHQL KHFVEHNGSS VSLPDDNGFY ALQWAALNNS LHVAQYIIQH GGDVNSADNI QQTPLHWAAV
101: KGSIDVADLL LQHGARIEAV DVNGFRAVHV ASQYGQTAFV NHIIVDYAAD YNALDIEGRS PLHWAAYNGF TETVRLLLFR DACQNRQDNT GCTPLHWAVI
201: KENVEACTLL VHAGTKEELI LKDNTGSTPL KLASDKGHRQ LALFLSKAMR TRKNSFVDKI FCGKLGETSY APMLFSLIVI LMVLFITSIV SASNLPKITA
301: MVGLWACFGL SCGVYALITF YRVSRKDPGY VKRTGEANSQ HTANDPLIDI NFKNPSWKGN WSQLCPTCKI IRPVRSKHCP TCKRCVEQFD HHCPWISNCV
401: GKKNKRYFLV FVIMGALTSF VGGTTAVQRL WRGIPQVHHG ESWIKHIVIE HPDAAVFLFF DLLIFIATMT LTISQSYMIA RNITTNELWN AKRFSYLRGP
501: DGRFYNPYNH GLRRNCTDFL VHGYTRDDEV VPSSIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)