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AT1G10570.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cysteine proteinases superfamily protein
Curator
Summary (TAIR10)
Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation.
Computational
Description (TAIR10)
OVERLY TOLERANT TO SALT 2 (OTS2); CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: UB-like protease 1D (TAIR:AT1G60220.1); Has 1265 Blast hits to 1250 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 616; Fungi - 251; Plants - 239; Viruses - 3; Other Eukaryotes - 156 (source: NCBI BLink).
Protein Annotations
EC:3.4.22.68eggNOG:COG5160eggNOG:KOG0779EMBL:AC007067
EMBL:AY092981EMBL:AY128798EMBL:CP002684EnsemblPlants:AT1G10570
EnsemblPlants:AT1G10570.1entrez:837598GeneID:837598Genevisible:Q8RWN0
GO:GO:0004175GO:GO:0005634GO:GO:0005654GO:GO:0009651
GO:GO:0010228GO:GO:0016926GO:GO:0016929hmmpanther:PTHR12606
hmmpanther:PTHR12606:SF28HOGENOM:HOG000128552InParanoid:Q8RWN0InterPro:IPR003653
KEGG:ath:AT1G10570KO:K16287MEROPS:C48.A05OMA:SSCRKKS
PaxDb:Q8RWN0Pfam:PF02902Pfam:Q8RWN0Pfscan:PS50600
PhylomeDB:Q8RWN0PRIDE:Q8RWN0PRO:PR:Q8RWN0PROSITE:PS50600
ProteinModelPortal:Q8RWN0Proteomes:UP000006548RefSeq:NP_172527.2RefSeq:NP_973802.1
SMR:Q8RWN0STRING:3702.AT1G10570.1SUPFAM:SSF54001TAIR:AT1G10570
tair10-symbols:OTS2tair10-symbols:ULP1CUniGene:At.42174UniProt:Q8RWN0
Coordinates (TAIR10) chr1:+:3487639..3491102
Molecular Weight (calculated) 66082.40 Da
IEP (calculated) 6.74
GRAVY (calculated) -0.69
Length 571 amino acids
Sequence (TAIR10)
(BLAST)
001: MKRQRAIELD RVKKTMLNID WDDALGDEEV PELEIIATDK IPPREPTLSG YEPAVSVRSL RDNELDDHLK RQRSLLTRLG DKLADKGEKI RNRIGELEYE
101: KQRRMFQQRT KMQDADNGCQ ILEKPKSSDV FMRASTASKD TSGQGTSGSK DVSRSTFAAH FSDNLKMGPQ PVKLVNDKLQ DLGRGSWISK ANRDSIIEKN
201: NVWRSLPRLS KCKVSLKNFY SESKDPKGDR RPNEAYGKGK PNESSPYLLV DDDDGDDDKV IGYETPRHWS LKASPLQSSS CRKKSDDKVI NLDEDEPLSP
301: MVVEEACELP EGLPEDIYYP SSDQSDGRDL VQVSLKDLKC LSPGEYLTSP VINFYIRYVQ HHVFSADKTA ANCHFFNTFF YKKLTEAVSY KGNDRDAYFV
401: KFRRWWKGFD LFCKSYIFIP IHEDLHWSLV IICIPDKEDE SGLTIIHLDS LGLHPRNLIF NNVKRFLREE WNYLNQDAPL DLPISAKVWR DLPNMINEAE
501: VQVPQQKNDF DCGLFLLFFI RRFIEEAPQR LTLQDLKMIH KKWFKPEEAS ALRIKIWNIL VDLFRKGNQT D
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)