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AT1G30530.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.474
golgi 0.422
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : UDP-glucosyl transferase 78D1
Curator
Summary (TAIR10)
The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin
Computational
Description (TAIR10)
UDP-glucosyl transferase 78D1 (UGT78D1); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D2 (TAIR:AT5G17050.1); Has 7371 Blast hits to 7330 proteins in 440 species: Archae - 0; Bacteria - 437; Metazoa - 1880; Fungi - 26; Plants - 4903; Viruses - 71; Other Eukaryotes - 54 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1819eggNOG:KOG1192EMBL:KJ138977EnsemblPlants:AT1G30530
EnsemblPlants:AT1G30530.1entrez:839933ExpressionAtlas:W8PVA4GeneID:839933
GO:GO:0016758Gramene:AT1G30530.1gramene_pathway:2.4.1.-gramene_pathway:2.4.1.91
gramene_pathway:PWY-5320gramene_pathway:PWY-5321hmmpanther:PTHR11926hmmpanther:PTHR11926:SF292
InterPro:IPR002213KEGG:ath:AT1G30530KO:K15787OMA:GANSLCA
PANTHER:PTHR11926PaxDb:W8PVA4Pfam:PF00201Pfam:Q9S9P6
PhylomeDB:W8PVA4ProteinModelPortal:W8PVA4RefSeq:NP_564357.1SMR:W8PVA4
STRING:3702.AT1G30530.1SUPFAM:SSF53756tair10-symbols:UGT78D1UniGene:At.21995
UniProt:Q9S9P6UniProt:W8PVA4
Coordinates (TAIR10) chr1:+:10814917..10816374
Molecular Weight (calculated) 50097.60 Da
IEP (calculated) 5.36
GRAVY (calculated) 0.04
Length 453 amino acids
Sequence (TAIR10)
(BLAST)
001: MTKFSEPIRD SHVAVLAFFP VGAHAGPLLA VTRRLAAASP STIFSFFNTA RSNASLFSSD HPENIKVHDV SDGVPEGTML GNPLEMVELF LEAAPRIFRS
101: EIAAAEIEVG KKVTCMLTDA FFWFAADIAA ELNATWVAFW AGGANSLCAH LYTDLIRETI GLKDVSMEET LGFIPGMENY RVKDIPEEVV FEDLDSVFPK
201: ALYQMSLALP RASAVFISSF EELEPTLNYN LRSKLKRFLN IAPLTLLSST SEKEMRDPHG CFAWMGKRSA ASVAYISFGT VMEPPPEELV AIAQGLESSK
301: VPFVWSLKEK NMVHLPKGFL DRTREQGIVV PWAPQVELLK HEAMGVNVTH CGWNSVLESV SAGVPMIGRP ILADNRLNGR AVEVVWKVGV MMDNGVFTKE
401: GFEKCLNDVF VHDDGKTMKA NAKKLKEKLQ EDFSMKGSSL ENFKILLDEI VKV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)