AT1G30470.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.708 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : SIT4 phosphatase-associated family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
SIT4 phosphatase-associated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT3G45190.1); Has 14427 Blast hits to 7672 proteins in 774 species: Archae - 138; Bacteria - 5542; Metazoa - 3700; Fungi - 2195; Plants - 440; Viruses - 108; Other Eukaryotes - 2304 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:10779423..10786415 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 89892.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.17 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.46 | ||||||||||||||||||||||||||||||||
| Length | 811 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFWRMAGLST ASAVEAILDK DSFTLEDLLD EDEIIQECKA LNGRLLNFLR EKVQVEQLIR YIIEEPLEDV EKKRTFKFPF IACEIFTCEI EMILKTLVED 101: EELMLLLFSF LEAKETHNSL LAGYFSKVVI CLLVRKTIPF MQFIKDHQEI LKQLVDLIGI TSIMEVLKRL VGTDEHLYSN YTSAMQWIED TDVLEMIVDK 201: FGSSESPEVH ANAAEILCTV ARYAPPGLAT KLSSPSCTGR LLKHTLEDSR PKSVLVNSLS VCISLLDPKR FTLGTYHIYG RQLTHGSMVT NPETVEGMLG 301: SLGDLLMLLN VSSAEGVLLT TYGKLQPPLG KHRLKIVEFI SVLLTVGSEA AEKEVIRLGA VKRVLDLFFE YPYNNFLHHH VENVILSCME SKNSQLVDHL 401: LSECNLIGSI LEAEKDSTLT AGDSDKLQPT VPAEGKKPLR IGNIGHLTRI SNKLLQLANS NVEIQSHLQE NSKWVDWQTD VLSKRNTLEN VYSWACGRPT 501: SLHDRSRDSD DDDYHDRDYD VAALANNLSQ AFRYGIYSND DMDEAQGSME RDDEDVYFDD ESAEVVISSL RLGDDQESDS LFTNSNWFAF DDDKAANERS 601: MTSAASPSPN ADGDGEDDDD VVIGEADEFN ATAASSPPVD METEDSTSKH PSENPSEPEP EKSPAWVEWR ETSESTAPPS SNPEETTILS NGDVQIEKED 701: NDDDDDTDNK SAVKTPGVPG DETTEKLPDE SGVEPTENSP KASGIEPTES SPKASGAEVT GNLRDSDPAE SHADAKSSEP ESPHGTKETE VAAEADTKET 801: EEAVKEPEKV V |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)