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AT1G30220.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.988
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : inositol transporter 2
Curator
Summary (TAIR10)
Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin (PSI) domains from animal type I receptors.
Computational
Description (TAIR10)
inositol transporter 2 (INT2); CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: inositol transporter 4 (TAIR:AT4G16480.1); Has 52249 Blast hits to 41863 proteins in 2438 species: Archae - 698; Bacteria - 26108; Metazoa - 7164; Fungi - 11733; Plants - 4458; Viruses - 2; Other Eukaryotes - 2086 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNQKeggNOG:KOG0254EMBL:AC073506EMBL:AJ973176
EMBL:AY074333EMBL:AY123031EMBL:CP002684EnsemblPlants:AT1G30220
EnsemblPlants:AT1G30220.1entrez:839902GeneID:839902Genevisible:Q9C757
GO:GO:0005351GO:GO:0005355GO:GO:0005366GO:GO:0005886
GO:GO:0005887GO:GO:0015798GO:GO:0015992GO:GO:0023052
GO:GO:0035428GO:GO:0046323GO:GO:0090406GO:GO:1904659
Gramene:AT1G30220.1hmmpanther:PTHR23500hmmpanther:PTHR23500:SF149HOGENOM:HOG000202868
InParanoid:Q9C757InterPro:IPR003663InterPro:IPR005828InterPro:IPR005829
InterPro:IPR020846KEGG:ath:AT1G30220KO:K08150ncoils:Coil
OMA:CTACLVFPaxDb:Q9C757Pfam:PF00083Pfam:Q9C757
Pfscan:PS50850PhylomeDB:Q9C757PIR:D86426PRIDE:Q9C757
PRINTS:PR00171PRO:PR:Q9C757PROSITE:PS00216PROSITE:PS00217
PROSITE:PS50850ProteinModelPortal:Q9C757Proteomes:UP000006548Reactome:R-ATH-429593
RefSeq:NP_174313.1scanprosite:PS00216scanprosite:PS00217SMR:Q9C757
STRING:3702.AT1G30220.1SUPFAM:SSF103473TAIR:AT1G30220tair10-symbols:ATINT2
tair10-symbols:INT2TCDB:2.A.1.1.63TIGRfam:TIGR00879TIGRFAMs:TIGR00879
TMHMM:TMhelixUniGene:At.40594UniProt:Q9C757
Coordinates (TAIR10) chr1:-:10632957..10635439
Molecular Weight (calculated) 63452.90 Da
IEP (calculated) 8.39
GRAVY (calculated) 0.38
Length 580 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGGIIHGGA DESAFKECFS LTWKNPYVLR LAFSAGIGGL LFGYDTGVIS GALLYIRDDF KSVDRNTWLQ EMIVSMAVAG AIVGAAIGGW ANDKLGRRSA
101: ILMADFLFLL GAIIMAAAPN PSLLVVGRVF VGLGVGMASM TAPLYISEAS PAKIRGALVS TNGFLITGGQ FLSYLINLAF TDVTGTWRWM LGIAGIPALL
201: QFVLMFTLPE SPRWLYRKGR EEEAKAILRR IYSAEDVEQE IRALKDSVET EILEEGSSEK INMIKLCKAK TVRRGLIAGV GLQVFQQFVG INTVMYYSPT
301: IVQLAGFASN RTALLLSLVT AGLNAFGSII SIYFIDRIGR KKLLIISLFG VIISLGILTG VFYEAATHAP AISSLETQRF NNISCPDYKS AMNTNAWDCM
401: TCLKASSPSC GYCSSPIGKE HPGACWISDD SVKDLCHNEN RLWYTRGCPS NFGWFALLGL GLYIIFFSPG MGTVPWIVNS EIYPLRFRGI CGGIAATANW
501: ISNLIVAQSF LSLTEAIGTS WTFLIFGVIS VIALLFVMVC VPETKGMPME EIEKMLERRS MEFKFWKKKS KLVEKQNQSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)