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AT1G28010.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.994
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-glycoprotein 14
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-glycoprotein 14 (PGP14); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 13 (TAIR:AT1G27940.1); Has 862231 Blast hits to 397322 proteins in 4187 species: Archae - 14893; Bacteria - 671155; Metazoa - 18443; Fungi - 12341; Plants - 9398; Viruses - 47; Other Eukaryotes - 135954 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G28010-MONOMEReggNOG:COG1132eggNOG:KOG0055EMBL:AC069471
EMBL:CP002684EnsemblPlants:AT1G28010EnsemblPlants:AT1G28010.1entrez:839694
Gene3D:3.40.50.300GeneID:839694Genevisible:Q9C7F2GO:GO:0005524
GO:GO:0016021GO:GO:0042626GO:GO:0055085Gramene:AT1G28010.1
hmmpanther:PTHR24221hmmpanther:PTHR24221:SF235InParanoid:Q9C7F2InterPro:IPR003439
InterPro:IPR003593InterPro:IPR011527InterPro:IPR017871InterPro:IPR027417
iPTMnet:Q9C7F2KEGG:ath:AT1G28010KO:K05658ncoils:Coil
OMA:AANIMNMPaxDb:Q9C7F2Pfam:PF00005Pfam:PF00664
Pfam:Q9C7F2Pfscan:PS50893Pfscan:PS50929PhylomeDB:Q9C7F2
PIR:F86405PRIDE:Q9C7F2PRO:PR:Q9C7F2PROSITE:PS00211
PROSITE:PS50893PROSITE:PS50929ProteinModelPortal:Q9C7F2Proteomes:UP000006548
RefSeq:NP_174122.1scanprosite:PS00211SMART:SM00382SMR:Q9C7F2
STRING:3702.AT1G28010.1SUPFAM:SSF52540SUPFAM:SSF90123TAIR:AT1G28010
tair10-symbols:ABCB14tair10-symbols:ATABCB14tair10-symbols:PGP14TMHMM:TMhelix
UniGene:At.40954UniGene:At.51796UniProt:Q9C7F2
Coordinates (TAIR10) chr1:+:9763436..9767917
Molecular Weight (calculated) 136184.00 Da
IEP (calculated) 9.16
GRAVY (calculated) 0.07
Length 1247 amino acids
Sequence (TAIR10)
(BLAST)
0001: MDNIEPPFSG NIHAETEVKK EEKKKMKKES VSLMGLFSAA DNVDYFLMFL GGLGTCIHGG TLPLFFVFFG GMLDSLGKLS TDPNAISSRV SQNALYLVYL
0101: GLVNLVSAWI GVACWMQTGE RQTARLRINY LKSILAKDIT FFDTEARDSN FIFHISSDAI LVQDAIGDKT GHVLRYLCQF IAGFVIGFLS VWQLTLLTLG
0201: VVPLIAIAGG GYAIVMSTIS EKSEAAYADA GKVAEEVMSQ VRTVYAFVGE EKAVKSYSNS LKKALKLSKR SGLAKGLGVG LTYSLLFCAW ALLFWYASLL
0301: VRHGKTNGAK AFTTILNVIY SGFALGQAVP SLSAISKGRV AAANIFKMIG NNNLESSERL ENGTTLQNVV GKIEFCGVSF AYPSRPNMVF ENLSFTIHSG
0401: KTFAFVGPSG SGKSTIISMV QRFYEPRSGE ILLDGNDIKN LKLKWLREQM GLVSQEPALF ATTIASNILL GKEKANMDQI IEAAKAANAD SFIKSLPNGY
0501: NTQVGEGGTQ LSGGQKQRIA IARAVLRNPK ILLLDEATSA LDAESEKIVQ QALDNVMEKR TTIVIAHRLS TIRNVDKIVV LRDGQVRETG SHSELISRGG
0601: DYATLVNCQD TEPQENLRSV MYESCRSQAG SYSSRRVFSS RRTSSFREDQ EKTEKDSKGE DLISSSSMIW ELIKLNAPEW LYALLGSIGA VLAGSQPALF
0701: SMGLAYVLTT FYSPFPSLIK REVDKVAIIF VGAGIVTAPI YILQHYFYTL MGERLTSRVR LSLFSAILSN EIGWFDLDEN NTGSLTSILA ADATLVRSAI
0801: ADRLSTIVQN LSLTITALAL AFFYSWRVAA VVTACFPLLI AASLTEQLFL KGFGGDYTRA YSRATSLARE AISNIRTVAA FSAEKQISEQ FTCELSKPTK
0901: SALLRGHISG FGYGLSQCLA FCSYALGLWY ISVLIKRNET NFEDSIKSFM VLLVTAYSVA ETLALTPDIV KGTQALGSVF RVLHRETEIP PDQPNSRLVT
1001: HIKGDIEFRN VSFAYPTRPE IAIFKNLNLR VSAGKSLAVV GPSGSGKSTV IGLIMRFYDP SNGNLCIDGH DIKSVNLRSL RKKLALVQQE PALFSTSIHE
1101: NIKYGNENAS EAEIIEAAKA ANAHEFISRM EEGYMTHVGD KGVQLSGGQK QRVAIARAVL KDPSVLLLDE ATSALDTSAE KQVQEALDKL MKGRTTILVA
1201: HRLSTIRKAD TIVVLHKGKV VEKGSHRELV SKSDGFYKKL TSLQEAV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)