AT1G24460.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa - 70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other Eukaryotes - 33775 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:8666072..8672338 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 202132.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.29 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||
| Length | 1807 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MHEKDDLPQD SIADGIENDD ESNGQEEEEL DPDQGTAFVD SKEDMFVDAP EELNFDTPSK EALTTDDDDN DDLGTHFNIE KGDWEKELAG LQEQFKLLTG 0101: ENDLTGEDGN TTVDIVSRFS KFLKTAKEER IQHEVALKEL HGVISGRDDE IADLTTKISE LSSSQPVSEM GDQAQNLEHL EAATDRIMVS LSNVFGEGEL 0201: QYGSSISEKL AHLENRVSFL GAKYTEFYYG ADQLRKCLAS DVLDLSFQED FGSALGAACS ELFELKQKEA AFFERLSHLE DENRNFVEQV NREKEMCESM 0301: RTEFEKLKAE LELEKTKCTN TKEKLSMAVT KGKALVQNRD ALKHQLSEKT TELANRLTEL QEKEIALESS EVMKGQLEQS LTEKTDELEK CYAELNDRSV 0401: SLEAYELTKK ELEQSLAEKT KELEECLTKL QEMSTALDQS ELDKGELAKS DAMVASYQEM LSVRNSIIEN IETILSNIYT PEEGHSFDIV EKVRSLAEER 0501: KELTNVSQEY NRLKDLIVSI DLPEEMSQSS LESRLAWLRE SFLQGKDEVN ALQNRIESVS MSLSAEMEEK SNIRKELDDL SFSLKKMEET AERGSLEREE 0601: IVRRLVETSG LMTEGVEDHT SSDINLLVDR SFDKIEKQIR DSSDSSYGNE EIFEAFQSLL YVRDLEFSLC KEMLGEGELI SFQVSNLSDE LKIASQELAF 0701: VKEEKIALEK DLERSEEKSA LLRDKLSMAI KKGKGLVQDR EKFKTQLDEK KSEIEKLMLE LQQLGGTVDG YKNQIDMLSR DLERTKELET ELVATKEERD 0801: QLQQSLSLID TLLQKVMKSV EIIALPVDLA SEDPSEKIDR LAGYIQEVQL ARVEEQEEIE KVKSEVDALT SKLAETQTAL KLVEDALSTA EDNISRLTEE 0901: NRNVQAAKEN AELELQKAVA DASSVASELD EVLATKSTLE AALMQAERNI SDIISEKEEA QGRTATAEME QEMLQKEASI QKNKLTEAHS TINSLEETLA 1001: QTESNMDSLS KQIEDDKVLT TSLKNELEKL KIEAEFERNK MAEASLTIVS HEEALMKAEN SLSALQGEMV KAEGEISTLS SKLNVCMEEL AGSSGNSQSK 1101: SLEIITHLDN LQMLLKDGGL ISKVNEFLQR KFKSLRDVDV IARDITRNIG ENGLLAGEMG NAEVTAVLLI TLLYFQDDST EAKSLLSDLD NSVNTEPENS 1201: QGSAADEDEI SSSLRKMAEG VRLRNKTLEN NFEGFSTSID TLIATLMQNM TAARADVLNI VGHNSSLEEQ VRSVENIVRE QENTISALQK DLSSLISACG 1301: AAARELQLEV KNNLLELVQF QENENGGEME STEDPQELHV SECAQRIKEL SSAAEKACAT LKLFETTNNA AATVIRDMEN RLTEASVALE KAVLERDLNQ 1401: TKVSSSEAKV ESLEELCQDL KLQVKEEKWH EKEVELSTLY DKLLVQEQGN FYLLLSLISL NLHHIITTIL KCHVLLLRIA EAKENLIPAS DMRTLFDKIN 1501: GIEVPSVDLV NGLDPQSPYD VKKLFAIVDS VTEMQHQIDI LSYGQKELNS TLAEKDLEIQ GLKKATEAES TTELELVKAK NELSKLISGL EKLLGILASN 1601: NPVVDPNFSE SWTLVQALEK KITSLLLESE SSKSRAQELG LKLAGSEKLV DKLSLRVKEF EEKLQTKAIQ PDIVQERSIF ETPRAPSTSE ISEIEDKGAL 1701: GIKSISPVPT AAQVRTVRKG STDHLSINID SESEHLMNNN ETDEDKGHVF KSLNMSGLIP TQGKIIADRV DGIWVSGGRV LMSRPQARLG VMVYSLLLHL 1801: WLLASIL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)