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AT1G23010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
ASURE: endoplasmic reticulum
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cupredoxin superfamily protein
Curator
Summary (TAIR10)
Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.
Computational
Description (TAIR10)
Low Phosphate Root1 (LPR1); CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G71040.1); Has 3143 Blast hits to 2693 proteins in 814 species: Archae - 12; Bacteria - 2669; Metazoa - 8; Fungi - 64; Plants - 261; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G23010-MONOMEREC:1.-.-.-eggNOG:COG2132eggNOG:ENOG410IHX7
EMBL:AF000657EMBL:AK117988EMBL:BT005929EMBL:CP002684
EnsemblPlants:AT1G23010EnsemblPlants:AT1G23010.1entrez:838909Gene3D:2.60.40.420
GeneID:838909Genevisible:F4I4K5GO:GO:0005507GO:GO:0005783
GO:GO:0005789GO:GO:0010073GO:GO:0016036GO:GO:0016682
GO:GO:0016722GO:GO:0080167Gramene:AT1G23010.1hmmpanther:PTHR11709
hmmpanther:PTHR11709:SF89InParanoid:F4I4K5InterPro:IPR001117InterPro:IPR008972
InterPro:IPR011706KEGG:ath:AT1G23010OMA:KLKMFVDPaxDb:F4I4K5
Pfam:F4I4K5Pfam:PF00394Pfam:PF07731PIR:B86364
PRIDE:F4I4K5PRO:PR:F4I4K5ProteinModelPortal:F4I4K5Proteomes:UP000006548
RefSeq:NP_173714.2SMR:F4I4K5STRING:3702.AT1G23010.1SUPFAM:SSF49503
TAIR:AT1G23010tair10-symbols:LPR1UniGene:At.28066UniProt:F4I4K5
Coordinates (TAIR10) chr1:+:8147353..8149580
Molecular Weight (calculated) 66001.30 Da
IEP (calculated) 8.34
GRAVY (calculated) -0.30
Length 581 amino acids
Sequence (TAIR10)
(BLAST)
001: MESLLCRRRI KRVMVLIIAL TWLRSTCGEL EDQLFEVGKL KMFVDDLPDM PRLYGFNSVH GIIKPASLQI GMFSTKWKFH RDLPATPVFA YGTSRSKATV
101: PGPTIETVYG VDTYVTWRNH LPKSHILPWD PTISPATPKH GGIPTVVHLH GGIHEPTSDG NADAWFTAGF RETGPKWTKT TLHYENKQQP GNMWYHDHAM
201: GLTRVNLLAG LVGAYILRHH AVESPFQLPT GDEFDRPLII FDRSFRKDGS IYMNATGNNP SIHPQWQPEY FGDVIIVNGK AWPRLNVRRR KYRFRIINAS
301: NARFFKFFFS NGLDFIVVGS DSAYLSKPVM TKSILLSPSE IVDVVVDFYK SPSRTVVLAN DAPYPYPSGD PVNEENGKVM KFIINNESED DTCTIPKKLI
401: NYPNADVSNA VLTRYISMYE YVSNSDEPTH LLVNGLPYEA PVTETPKSGT TEVWEVINLT EDNHPLHIHL GLFKVVEQTA LLAAGLEEFK ECMTKQNDAV
501: KCQISKYARG KKTAVTAHER GWKNVFKMMP GHVTRILVRF SYIHTNASYP FDPTQEPGYV YHCHILDHED NMMMRPLKVI I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)