AT1G54570.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Esterase/lipase/thioesterase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41130.1); Has 651 Blast hits to 637 proteins in 188 species: Archae - 0; Bacteria - 283; Metazoa - 139; Fungi - 19; Plants - 149; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:20380649..20384953 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78208.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.06 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 704 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATCSSSLLV LPNLRLSSNQ RRNFKVRAQI SGENKKATSL EPVNNNGSVS LSTTVQNQKG ANEVNGKGKS KRKIVSDEIE LLWDDGYGSK SVKDYFAAAK 101: EILKADGGPP RWFSPVDCGR PVEDAPTLLF LPGMDGTGMG LVPHHKALGK AFHVSCLHIP VLDRTPFEGL LKVVEDVLRQ EQATRPNKPI YLVGDSFGGC 201: LALAVAARNR SLDLVLILVN PATSFDRSPL QPLLPILEMV PEELHFTVPY ALSFIMGDPI KMATLGIDNQ LPTGVKIEKL RQRLTKTMLP LLSELGGIIP 301: RETLLWKLKL LRSGCAYANS RIHAVQAEVL VLASGKDMML PSQEEAKRLH GLLKNCSVRC FKDNGHTLLL EDSISLLTVI KGTGKYRRSW RYDLVSDFLP 401: PSKGELAYAL DEVLGFLRNA VGSVFFSTME DGKIVKGLAG VPDKGPVLLV GYHMLMGLEL GPMSEAFIKE KNILFRGMAH PVLYSDNDPA KAFDYGDWIK 501: VFGAYPVTAT NLFKLLDSKS HVLLFPGGAR EALHNRGEQY KLIWPEQQEF VRMAARFGAT IVPFGTVGED DIAELVLDYN DLMKIPILND YITEVTRDTK 601: QFKLREESEG EVANQPLYLP GLIPKVPGRF YYLFGKPIET KGRPELVKDK EEANQVYLEV KAEVENSIAY LLKKREEDPY RSVLDRLNYS LTHTTATHVP 701: SFEP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)