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AT1G22800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 11 (InterPro:IPR013216); Has 2362 Blast hits to 2362 proteins in 955 species: Archae - 8; Bacteria - 1684; Metazoa - 119; Fungi - 106; Plants - 46; Viruses - 0; Other Eukaryotes - 399 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0500eggNOG:KOG2940EMBL:AK228010EnsemblPlants:AT1G22800
EnsemblPlants:AT1G22800.1entrez:838886ExpressionAtlas:Q0WSC3Gene3D:3.40.50.150
GeneID:838886Genevisible:O80543GO:GO:0008168Gramene:AT1G22800.1
InterPro:IPR013216InterPro:IPR029063KEGG:ath:AT1G22800KO:K18162
OMA:CRRPWAAPaxDb:Q0WSC3Pfam:O80543Pfam:PF08241
PhylomeDB:Q0WSC3PRIDE:Q0WSC3ProteinModelPortal:Q0WSC3RefSeq:NP_173694.1
STRING:3702.AT1G22800.1SUPFAM:SSF53335TAIR:AT1G22800UniGene:At.48219
UniGene:At.65041UniProt:O80543UniProt:Q0WSC3
Coordinates (TAIR10) chr1:+:8072020..8074039
Molecular Weight (calculated) 39368.20 Da
IEP (calculated) 7.91
GRAVY (calculated) -0.30
Length 355 amino acids
Sequence (TAIR10)
(BLAST)
001: MRRINSLYGR IGLLKRVPEK STKQAHTFLA SLSFSTEGAY GGDGEFQQNS SKVKIFDRDL KRIHRDRAAW LSRQKNDSFV DAVADNLLDR LEDCKKSFPT
101: AFCLGGSLGA VKRLLRGRGG IEKLIMMDTS YDMIKSCRDA QDDSLDNSIE TSYFVGDEEF LPVKESSVDL IISSLGLHWT NDLPGSMIQC KLALKPDGLF
201: LAAILGGETL KELRIACTLA HMEREGGISP RLSPLAQVRD AGNLLTRAGF SLPGVDVDEY VVKYKRAMDL IEHLRAMGET NALLERNKIL NRETAVATAA
301: IYDSMFATED GTIPATFQVI YMTGWREHSS HPQAKRRGSA TVSFTDLQKQ FGGQS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)