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AT1G17260.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.500
vacuole 0.500
ASURE: cytosol,vacuole
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31023727 (2019): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:30865669 (2019): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:23990937 (2013): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:19334764 (2009): plasma membrane
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : autoinhibited H(+)-ATPase isoform 10
Curator
Summary (TAIR10)
belongs to H+-APTase gene family, involved in proanthocyanidin biosynthesis, disturbs the vacuolar biogenesis and acidification process
Computational
Description (TAIR10)
autoinhibited H(+)-ATPase isoform 10 (AHA10); FUNCTIONS IN: ATPase activity, cation-transporting ATPase activity, ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: vacuole organization, vacuolar acidification, proanthocyanidin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 8 (TAIR:AT3G42640.1); Has 37639 Blast hits to 33046 proteins in 3187 species: Archae - 705; Bacteria - 24196; Metazoa - 3861; Fungi - 2534; Plants - 1888; Viruses - 3; Other Eukaryotes - 4452 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G17260-MONOMERBioGrid:23537EC:3.6.3.6eggNOG:COG0474
eggNOG:KOG0205EMBL:AC007651EMBL:CP002684EMBL:S74033
EnsemblPlants:AT1G17260EnsemblPlants:AT1G17260.1entrez:838297Gene3D:1.20.1110.10
Gene3D:2.70.150.10Gene3D:3.40.1110.10GeneID:838297Genevisible:Q43128
GO:GO:0005524GO:GO:0005887GO:GO:0006754GO:GO:0007033
GO:GO:0007035GO:GO:0008553GO:GO:0009506GO:GO:0009507
GO:GO:0009705GO:GO:0010023GO:GO:0010214GO:GO:0015662
GO:GO:0019829GO:GO:0034220GO:GO:0046872GO:GO:0098655
GO:GO:1902600Gramene:AT1G17260.1hmmpanther:PTHR24093hmmpanther:PTHR24093:SF355
HOGENOM:HOG000160005InParanoid:Q43128InterPro:IPR001757InterPro:IPR004014
InterPro:IPR006534InterPro:IPR008250InterPro:IPR018303InterPro:IPR023214
InterPro:IPR023298InterPro:IPR023299iPTMnet:Q43128KEGG:ath:AT1G17260
KO:K01535MINT:MINT-8067533OMA:AYQEIPEPaxDb:Q43128
Pfam:PF00122Pfam:PF00690Pfam:PF00702Pfam:Q43128
PhylomeDB:Q43128PIR:S66367PRIDE:Q43128PRINTS:PR00120
PRO:PR:Q43128PROSITE:PS00154ProteinModelPortal:Q43128Proteomes:UP000006548
RefSeq:NP_173169.2scanprosite:PS00154SMART:SM00831SMR:Q43128
STRING:3702.AT1G17260.1SUPFAM:0049471SUPFAM:0049473SUPFAM:SSF56784
TAIR:AT1G17260tair10-symbols:AHA10TIGRfam:TIGR01494TIGRfam:TIGR01647
TIGRFAMs:TIGR01494TIGRFAMs:TIGR01647TMHMM:TMhelixUniGene:At.51646
UniProt:Q43128
Coordinates (TAIR10) chr1:+:5904058..5908898
Molecular Weight (calculated) 104821.00 Da
IEP (calculated) 6.37
GRAVY (calculated) 0.14
Length 947 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEDLDKPLL DPDTFNRKGI DLGILPLEEV FEYLRTSPQG LLSGDAEERL KIFGPNRLEE KQENRFVKFL GFMWNPLSWV MEAAALMAIA LANSQSLGPD
101: WEDFTGIVCL LLINATISFF EENNAGNAAA ALMARLALKT RVLRDGQWQE QDASILVPGD IISIKLGDII PADARLLEGD PLKIDQSVLT GESLPVTKKK
201: GEQVFSGSTC KQGEIEAVVI ATGSTTFFGK TARLVDSTDV TGHFQQVLTS IGNFCICSIA VGMVLEIIIM FPVQHRSYRI GINNLLVLLI GGIPIAMPTV
301: LSVTLAIGSH RLSQQGAITK RMTAIEEMAG MDVLCCDKTG TLTLNSLTVD KNLIEVFVDY MDKDTILLLA GRASRLENQD AIDAAIVSML ADPREARANI
401: REIHFLPFNP VDKRTAITYI DSDGKWYRAT KGAPEQVLNL CQQKNEIAQR VYAIIDRFAE KGLRSLAVAY QEIPEKSNNS PGGPWRFCGL LPLFDPPRHD
501: SGETILRALS LGVCVKMITG DQLAIAKETG RRLGMGTNMY PSSSLLGHNN DEHEAIPVDE LIEMADGFAG VFPEHKYEIV KILQEMKHVV GMTGDGVNDA
601: PALKKADIGI AVADATDAAR SSADIVLTDP GLSVIISAVL TSRAIFQRMR NYTVYAVSIT IRIVLGFTLL ALIWEYDFPP FMVLIIAILN DGTIMTISKD
701: RVRPSPTPES WKLNQIFATG IVIGTYLALV TVLFYWIIVS TTFFEKHFHV KSIANNSEQV SSAMYLQVSI ISQALIFVTR SRGWSFFERP GTLLIFAFIL
801: AQLAATLIAV YANISFAKIT GIGWRWAGVI WLYSLIFYIP LDVIKFVFHY ALSGEAWNLV LDRKTAFTYK KDYGKDDGSP NVTISQRSRS AEELRGSRSR
901: ASWIAEQTRR RAEIARLLEV HSVSRHLESV IKLKQIDQRM IRAAHTV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)