AT1G16680.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Chaperone DnaJ-domain superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT1G79030.1); Has 18225 Blast hits to 18222 proteins in 3146 species: Archae - 124; Bacteria - 7724; Metazoa - 3097; Fungi - 1583; Plants - 1765; Viruses - 36; Other Eukaryotes - 3896 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:5702930..5705537 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62761.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.09 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||
| Length | 554 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEDIGLVKQG WIWLQSQKHL CLWFCTATQC FGEKTEALAE RHWPLVCSGC GKLLGLLSLS FVYWKDCILR GFQSSVKFGS AALLLIMWSC FLSLTSVSCL 101: VYVLLGMGAA GAVVLYLGRT PGIFIVGLFG ILILWMYANF WITGTLFIVG GYLFSLNHAR VVVLMATMYA MYCVKVRLGW PGVILSMNLA FLSNDIFICL 201: LQWCDTVSEK TQVEEPTKPE TVIDEEFPGE FEYSSVPAEE AEKKVHEDKS STKPASSSTV VSNMKEISTV KVVKIETDSA DEMKRILDSL NHYEALGLPL 301: FKKIDAALLK KDYRKKAMLV HPDKNMGSPL ASESFKKLQS AYEVLSDSVK RRDYDELLKK EESRTKIVCQ SSHASSHQNS AAYRSEESRR IHCTKCGNSH 401: IWVCTNRSKA KARWCQECGQ YHQAKDGDGW VEHKGTLVFE KAHKIEIPRA FVCAEGKVFD VSEWAICQGM ACRPNTHRPS FHVNMVGLEK ATQRSKSSRF 501: PWDLDVEMMD EDEEEFELWL QQALASGLFC ETSKRRKSWS PFKLTKKQSR RTST |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)