AT1G16270.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, nucleus; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G79570.1); Has 120346 Blast hits to 118920 proteins in 4807 species: Archae - 116; Bacteria - 12493; Metazoa - 46290; Fungi - 10609; Plants - 32462; Viruses - 473; Other Eukaryotes - 17903 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:5563890..5568145 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 126788.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.98 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1147 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MDRNRPPHPF QQHAMEPGYV NDSVPQGFTP DQTGLSNANV RPNPADVKPG LHYSIQTGEE FSLEFLRDRV ISQRSANPIA AGDINYPTGY NGHAGSEFGS 0101: DVSRMSMVGN GIRQYERTNP PVHEFGNKLG HIHSAPEASL CQDRSLGNFH GYASSSASGS LTAKVKVLCS FGGKILPRPG DSKLRYVGGE THIISIRKDI 0201: SWQELRQKVL EIYYRTHVVK YQLPGEDLDA LVSVSCDEDL LNMMEEYNEM ENRGGSQKLR MFLFSVSDLD GALLGVNKSD VDSEFQYVVA VNDMDLGSRS 0301: NSTLNGLDSS SANNLAELDV RNTEGINGVG PSQLTGIDFQ QSSMQYSESA PPTSFAQYPQ SIPHNGAFQF QQAVPPNATL QYAPSNPPSS SVHYPQSILP 0401: NSTLQYPQSI SSSSYGLYPQ YYGETEQFPM QYHDHNSSNY SIPIPFPGQP YPHPGITQQN APVQVEEPNI KPETKVRDYV EPENRHILAT NHQNPPQADD 0501: TEVKNREPSV ATTVPSQDAA HMLPPRRDTR QNTPVKPSTY RDAVITEQVP VSGEDDQLST SSGTCGLVHT DSESNLIDLD YPEPLQPTRR VYRSERIPRE 0601: QLEMLNRLSK SDDSLGSQFL MSHPQASTGQ QEPAKEAAGI SHEDSHIVND VENISGNVVA SNETLDKRTV SGGGIETEAR NLSHVDTERS HDIPEKQTSS 0701: GVLIDINDRF PQDFLSEIFA KALSDDMPSG ANPYQHDGAG VSLNVENHDP KNWSYFRNLA DEQFSDRDVA YIDRTPGFPS DMEDGGEIAR LHQVAPLTEN 0801: RVDPQMKVTE SEEFDAMVEN LRTSDCEQED EKSETRNAGL PPVGPSLADY DTSGLQIIMN DDLEELKELG SGTFGTVYHG KWRGSDVAIK RIKKSCFAGR 0901: SSEQERLTGE FWGEAEILSK LHHPNVVAFY GVVKDGPGAT LATVTEYMVD GSLRHVLVRK DRHLDRRKRL IIAMDAAFGM EYLHAKNIVH FDLKCDNLLV 1001: NLKDPSRPIC KVGDFGLSKI KRNTLVSGGV RGTLPWMAPE LLNGSSSKVS EKVDVFSFGI VLWEILTGEE PYANMHYGAI IGGIVNNTLR PTIPSYCDSD 1101: WRILMEECWA PNPTARPSFT EIAGRLRVMS TAATSNQSKP PAHKASK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)