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AT1G14530.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF1084)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
TOM THREE HOMOLOG 1 (THH1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 257 Blast hits to 256 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEVMeggNOG:ENOG41110A4EMBL:AB057678EMBL:AC010657
EMBL:AC012188EMBL:AY084894EMBL:BT002800EMBL:BT020325
EMBL:BT021134EMBL:CP002684EnsemblPlants:AT1G14530EnsemblPlants:AT1G14530.1
EnsemblPlants:AT1G14530.2entrez:838015GeneID:838015Genevisible:Q948R8
GO:GO:0009705GO:GO:0016021Gramene:AT1G14530.1Gramene:AT1G14530.2
hmmpanther:PTHR31142hmmpanther:PTHR31142:SF3HOGENOM:HOG000239356InParanoid:Q948R8
InterPro:IPR009457KEGG:ath:AT1G14530OMA:NMQPEILPaxDb:Q948R8
Pfam:PF06454Pfam:Q948R8PIR:B86280PRIDE:Q948R8
PRO:PR:Q948R8ProteinModelPortal:Q948R8Proteomes:UP000006548RefSeq:NP_563953.1
RefSeq:NP_849661.1STRING:3702.AT1G14530.1TAIR:AT1G14530tair10-symbols:THH1
TMHMM:TMhelixUniGene:At.16603UniProt:Q948R8
Coordinates (TAIR10) chr1:-:4971420..4973597
Molecular Weight (calculated) 34050.50 Da
IEP (calculated) 9.28
GRAVY (calculated) 0.58
Length 293 amino acids
Sequence (TAIR10)
(BLAST)
001: MRSGGLEMMS SSAIVAFNLK EGKNWWWDVN ESPVWQDRIF HVLAVLYGIV SVIAVIQLVR IQLRVPEYGW TTQKVFHFLN FMVNGVRALV FLFRRDAQNM
101: QPEILQHILL DIPSLAFFTT YALLVLFWAE IYYQARAVST DGLRPSFFTI NAVVYVIQIA LWLVLWWKPV HLMVIISKMF FAGVSLFAAL GFLLYGGRLF
201: LMLQRFPVES KGRRKKLQEV GYVTTICFTC FLIRCIMMCF DAFDDAADLD VLDHPILNFI YYLLVEILPS SLVLFILRKL PPKRGITQYH QIQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)