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AT1G09930.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : oligopeptide transporter 2
Curator
Summary (TAIR10)
oligopeptide transporter
Computational
Description (TAIR10)
oligopeptide transporter 2 (OPT2); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: sperm cell, flower, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Tetrapeptide transporter, OPT1/isp4 (InterPro:IPR004648), Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: oligopeptide transporter 4 (TAIR:AT5G64410.1); Has 1309 Blast hits to 1283 proteins in 148 species: Archae - 0; Bacteria - 69; Metazoa - 0; Fungi - 834; Plants - 392; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNZCeggNOG:KOG2262EMBL:AC000132EMBL:CP002684
EMBL:DQ446240EnsemblPlants:AT1G09930EnsemblPlants:AT1G09930.1entrez:837525
GeneID:837525Genevisible:O04514GO:GO:0005886GO:GO:0006857
GO:GO:0015031GO:GO:0015198GO:GO:0016020GO:GO:0016021
GO:GO:0055085Gramene:AT1G09930.1hmmpanther:PTHR22601hmmpanther:PTHR22601:SF23
HOGENOM:HOG000166970InParanoid:O04514InterPro:IPR004648InterPro:IPR004813
KEGG:ath:AT1G09930OMA:GENCPLAPaxDb:O04514Pfam:O04514
Pfam:PF03169PhylomeDB:O04514PIR:F86233PRIDE:O04514
PRO:PR:O04514ProteinModelPortal:O04514Proteomes:UP000006548RefSeq:NP_172464.1
STRING:3702.AT1G09930.1TAIR:AT1G09930tair10-symbols:ATOPT2tair10-symbols:OPT2
TIGRfam:TIGR00727TIGRfam:TIGR00728TIGRFAMs:TIGR00727TIGRFAMs:TIGR00728
TMHMM:TMhelixUniGene:At.51543UniProt:O04514
Coordinates (TAIR10) chr1:-:3227490..3230043
Molecular Weight (calculated) 82338.50 Da
IEP (calculated) 8.96
GRAVY (calculated) 0.50
Length 734 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAIELHKPE INADDDDDES PVEQVRLTVS NHDDPSLPVW TFRMWFLGLL SCILLSFLNT FFGYRTQPLM ITMISVQVVT LPLGKLMARV LPETKYKIGS
101: WEFSFNPGPF NVKEHVLISM FANAGAGFGS GTAYAVGIVD IIMAFYKRKI SFLASWILVI TTQILGYGWA GIMRKLVVDP AQMWWPTSVL QVSLFRALHE
201: KDNARMSRGK FFVIAFVCSF AWYIFPAYLF LTLSSISWVC WAFPKSITAQ QLGSGMSGLG IGAFALDWSV IASYLGSPLV TPFFAIVNVL VGYVLVMYMV
301: IPISYWGMNV YEANKFPIFS SDLFDKQGQL YNISTIVNNK FELDMENYQQ QGRVYLSTFF AISYGIGFAA IVSTLTHVAL FNGKGIWQQV RASTKAKMDI
401: HTRLMKKYKD IPGWWFYSLL AISLVLSLVL CIFMKDEIQM PWWGLLLASF MALTFTVPVS IITATTNQTP GLNIITEYLM GVLLPGRPIA NVCFKTYGYI
501: SMSQAISFLN DFKLGHYMKI PPRSMFLVQF IGTVIAGTVN ISVAWYLLTS VENICQKELL PPNSPWTCPS DRVFFDASVI WGLVGPKRIF GRLGNYPALN
601: WFFLGGLIGP VLVWLLQKAF PTKTWISQIN LPVLLGATAA MPPATSVNFN CWIIVGVIFN YFVFKYCKKW WQRYNYVLSA ALDAGLAFMG VLLYFSLTMN
701: GISINHWWGA KGENCPLASC PTAPGVLVDG CPVF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)