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AT1G09240.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nicotianamine synthase 3
Curator
Summary (TAIR10)
Encodes a nicotianamine synthase.
Computational
Description (TAIR10)
nicotianamine synthase 3 (NAS3); CONTAINS InterPro DOMAIN/s: Nicotianamine synthase (InterPro:IPR004298); BEST Arabidopsis thaliana protein match is: nicotianamine synthase 4 (TAIR:AT1G56430.1); Has 198 Blast hits to 195 proteins in 46 species: Archae - 20; Bacteria - 10; Metazoa - 0; Fungi - 20; Plants - 147; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G09240-MONOMERBRENDA:2.5.1.43EC:2.5.1.43eggNOG:ENOG410IFWJ
eggNOG:ENOG4111NF0EMBL:AB021936EMBL:AC003114EMBL:AY087620
EMBL:AY140031EMBL:BT008817EMBL:CP002684EnsemblPlants:AT1G09240
EnsemblPlants:AT1G09240.1entrez:837444Gene3D:3.40.50.150GeneID:837444
Genevisible:O80483GO:GO:0009555GO:GO:0009860GO:GO:0010233
GO:GO:0030410GO:GO:0030418Gramene:AT1G09240.1gramene_pathway:2.5.1.43
gramene_pathway:PWY-5957hmmpanther:PTHR32266hmmpanther:PTHR32266:SF12HOGENOM:HOG000025525
InParanoid:O80483InterPro:IPR004298InterPro:IPR029063KEGG:ath:AT1G09240
KO:K05953OMA:DISQRMFPaxDb:O80483Pfam:O80483
Pfam:PF03059Pfscan:PS51142PhylomeDB:O80483PIR:C86225
PRIDE:O80483PRO:PR:O80483PROSITE:PS51142ProteinModelPortal:O80483
Proteomes:UP000006548RefSeq:NP_172395.1SMR:O80483STRING:3702.AT1G09240.1
SUPFAM:SSF53335TAIR:AT1G09240tair10-symbols:ATNAS3tair10-symbols:NAS3
UniGene:At.42234UniProt:O80483
Coordinates (TAIR10) chr1:+:2984950..2985912
Molecular Weight (calculated) 35753.40 Da
IEP (calculated) 6.04
GRAVY (calculated) 0.00
Length 320 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)