AT1G09040.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09050.1); Has 614 Blast hits to 567 proteins in 104 species: Archae - 2; Bacteria - 12; Metazoa - 344; Fungi - 31; Plants - 81; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:2912362..2915174 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 102438.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.11 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||||||||||
| Length | 911 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVLLMGAENN LMEETTAVTE EDSYDDEFPC GDPQVEPRVG DEFQVDIPPM MSATKRAVFL STPVALDDSS YSFLIGLPVQ VMWIDKHRRG QGNGDDNVDM 101: NQSLKSLRAK KSRCSAKIRG KSDKNSETKK QRSNLEAVPV IPSSSWEDLE VASFVLGLYT FGKNFTQVKN FMENKGIGEI MLFYYGKFYN SAKYHSWSES 201: RKKRNRKCVF GRTLYSGWRQ QQLLTRLMPS IPDEPQKQIL VDVSKSFAEG TITLEKYVSA VKNLVGLRLL VDAVAIGKEK EDLTVPTSTP MKTKPWFTVS 301: SKSSLVPGEG DYNSLTSAGI INQLTGCSRL SKARCNDIFW GAVWPRLLAR GWHSQQPEDR GYFKSKDYIV FIVPGVKKFS RQELVKGDHY FDSVSDILTK 401: VVSEPELLEN ETGGVAAELS SDKSDEESVP SDSLRHRYLR SPCSNRGTLG MKFTVVDTSL ATGGKLCDLR NLNAECLVVS EPNVRLEVKD SPVLKNSLDS 501: QNVEKSQVRP LDAKNQVDDP MRFTIIDTSV DHCEKSSGFR RWRYLPSDET KRGHVGADSG IKEEKTLEKV KDPSKRVIKH RSTPRAETNY HAVNSAPYLK 601: RRRLSACISR ESPVSKHIPG DDDTKMTVCL ESEQQSICVV QQQTSTCEEM NQDKETVPLV EHMKLKSDQS KKTGTGPSSL LVEIQETTEI EPSGLNSNTG 701: VDKNCSPEKI STSHEQKPNG LCSVSKSDKK RASNDLEQKQ ALELPSISGL NNRSSSNDLG TTQELGSSEQ QHGQQNNTDG PRRQSTRKRP LTTRALEAME 801: SDFLTTKRMK STTKPEPRKR ESSTKKKRSA KACNRNGSAD LEHRREDRNI FIWKAPTSKP LDQIEDTKPR YLLNEARTES KTLDRIQESR PVLTEYRKLP 901: PIVLKLPFRR G |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)